Table 3 Genetic linkage mapping of microsatellites isolated from BAC end sequences.
From: A first generation BAC-based physical map of the rainbow trout genome
Marker | Clone | Contig | Chr. | Forward/Reverse Primers | GenBank |
|---|---|---|---|---|---|
OMY4002 | 170E02 | 58 | 14 | AGGTTATTTCCATTTCCCGC/GAGGAGTCCCAGAGGAAAGG | GF100674 |
OMY4003 | 378C10 | 58 | 14 | GACTTCTGCTCTGTCGGTCC/GACAGGTAGCCAAAACTCCG | GF100675 |
OMY4005 | 116G20 | 260 | 2 | TCATAAGTCATATGGTGACTATCATTT/GCAAATGCATTGACATCTCG | GF100676 |
OMY4006 | 162L19 | 260 | 2 | GATACACCCCTGCTGTTCGT/ACCCACCAAGCCACTCTCT | GF100677 |
OMY4007 | 146D09 | 260 | 2 | AACGCATAGGAGGGAGGATT/AAAATATTGTGGCCAGCAGC | GF100678 |
OMY4008 | 198M04 | 84 | 18 | ATGCTTTTGCAATTTCCTGG/ATGTTCATGCTGACCGACTG | GF100698 |
OMY4009 | 227H04 | 791 | 22 | CGCTGGAATGTTTTCATCTG/ATTTCACAAATGGCCAGGAG | GF100679 |
OMY4010 | 383M11 | 930 | 11 | TGATCATGGCACCCATACTG/TCACCCTGGTGGCCTACTAC | GF100680 |
OMY4011 | 154C16 | 930 | 11 | CAGTATGTCCTGTGAGGCCC/TCCACTTTAAGGGCATTTGG | GF100681 |
OMY4012 | 194O09 | 100 | 27 | AGCAAGCTCAATGAAGCACA/GAGCCCAGAGGTGAGATCAG | GF100682 |
OMY4013 | 251I01 | 100 | 27 | AGCGGACTGGGCTGTAATAA/ATGGACCAACTGAGCCTGAC | GF100683 |
OMY4015 | 318K03 | 138 | 27 | GTGGGCATTTTTGCTGACTT/CCGTTGATACATTTTGGCAG | GF100684 |
OMY4017 | 300B08 | 138 | 1 | TCATCTTCGACAGCATGGAG/GAAGGCCAAAGAAGCATGAA | GF100685 |
OMY4018 | 207I23 | 138 | 1 | CCTGTTTTGAAAATGGGACC/ACCAACCGCCATAGTAGCAG | GF100686 |
OMY4020 | 377G20 | 168 | 10 | TGTCCCTCAAAGTGCTACCC/CAGATGTGGGAACTTGAGCA | GF100687 |
OMY4022 | 207O04 | 168 | 10 | ACAAAGACCACAACGGCATT/TTGGCATTTACATATGTCCCC | GF100688 |
OMY4023 | 241D02 | 336 | 3 | ATCTCCAAGCCCTGAGGAAT/TTTTTGGTCCCCACAAGAAT | GF100689 |
OMY4024 | 203O06 | 336 | 3 | GAGCCAGTAATTCATTCGCC/GCAGGACAATCGTTTTAGGG | GF100690 |
OMY4025 | 278E22 | 336 | 3 | ATGACCCTGACGGGATGTTA/AGCTCCACACACAACACAGC | GF100691 |
OMY4026 | 178K11 | 450 | 22 | GTCGCAAAAGGCACTAAAGG/TGTGGCAGGTGCTGTTAGAG | GF100692 |
OMY4027 | 204J15 | 450 | 22 | ATGCCAAAGAAATGGACAGG/TGGCCTCCCTTGTCATTAAA | GF100693 |
OMY4028 | 220L14 | 450 | 1 | TCCCAGTGGATGGGACTTAG/GTGGGTGTCACATGTGTGGT | GF100694 |
OMY4038 | 218N06 | 172 | 6 | GGGGAAATTCAACCCACTTT/ATGGCGAATTGGCTAGACTG | GF100695 |
OMY4039 | 275M02 | 172 | 6 | ACTCTCCCCTGTCCTCCATT/CTAGTATCGACCCCTGCGAA | GF100696 |
OMY4040 | 386B11 | 172 | 6 | TGAAGGGGGCTGATTAGTTG/ACAGCGTTCCATAGCGAGAT | GF100697 |