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Table 1 CLANS clusters of sequence similar proteins in published tardigrade sequences1

From: Tardigrade workbench: comparing stress-related proteins, sequence-similar and functional protein clusters as well as RNA elements in tardigrades

Number/color Cluster description Sequences/percentage
2 Cytochrome c oxidase like (subunit 1, EC 1.9.3.1) 425 (3.94%)
3 Uncharacterized protein U88/Glycosyltransferase 8 family 302 (2.80%)
5 Proteins containing a Chitin binding domain 191 (1.77%)
6 Proteins containing an IBR/Neuroparsin/DUF1096 domain 189 (1.75%)
7 Fatty-acid binding protein (FABP) family 127 (1.18%)
8 TSP2 (remote homology to Sericin 1) 126 (1.17%)
9 Proteins containing a RNA polymerase Rpb3/Rpb11 dimerisation domain 92 (0.85%)
10 Metallothionein superfamily (Type 15 family./Thioredoxin like) 84 (0.78%)
12 GTP-binding elongation factor family. EF-Tu/EF-1A sub- family 79 (0.72%)
13 GST superfamily. Sigma family 78 (0.70%)
14 Ubiquitin family 75 (0.69%)
15 Cathepsin family (EC 3.4.22.-) 74 (0.67%)
16 Carboxypeptidase A inhibitor like 72 (0.64%)
17 Trichohyalin/Translation initiation factor like 69 (0.60%)
18 TSP2 65 (0.57%)
19 TSP2 61 (0.56%)
20 RNA/DNA-binding proteins 60 (0.55%)
  ...  
23 Small Heat Shock Protein (HSP20) family 53 (0.47%)
24 Diapause-specific proteins 51 (0.44%)
  ...  
38 LEA type 1 family proteins 31 (0.28%)
  ...  
  1. 1 Shown are the number of proteins found for the specified cluster, their percentages and the corresponding cluster number in Figure 1. The full Table with all clusters and their color code matching to Figure 1 is given in [additional file 1: Table S1]. Clusters 1, 4 and 11 contain rRNA and are given in [additional file 1].
  2. 2 Tardigrade specific protein cluster