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Table 1 Gene targets of tunicamycin identified in the tiling array experiment.

From: A comparative analysis of DNA barcode microarray feature size

ORF

Gene Name

GO Biological Process

tunicamycin treatment relevance

YJR105W

ADO1

purine base metabolic process

knockout sensitive to tunicamycin [23]

YBR243C

ALG7

protein amino acid N-linked glycosylation and others

known target of tunicamycin [1517]

YJL095W

BCK1

endoplasmic reticulum unfolded protein response and others

knockout sensitive [2123], overexpressor resistant [21] to tunicamycin

YDL145C

COP1

ER to Golgi vesicle-mediated transport and others

involved in ER to Golgi vesicle-mediated transport [25]

YGR196C

FYV8

unknown

knockout sensitive to tunicamycin [21]

YER083C

GET2

protein insertion into ER membrane and others

knockout sensitive to tunicamycin [24]

YFL031W

HAC1

specific RNA polymerase II transcription factor activity and others

knockout sensitive to tunicamycin [21, 23]

YHR079C

IRE1

endoplasmic reticulum unfolded protein response and others

knockout sensitive to tunicamycin [21, 23]

YOR246C

N/A

unknown

unknown

YFL032W

N/A

unknown

likely deletes HAC1 promoter [19]

YER010C

N/A

unknown

interacts with kinases Ptk2, Tpk1 [30]

YMR308C

PSE1

protein import into nucleus and others

interacts with Ulp1, regulating ubiquitination [31]

YBR002C

RER2

ER to Golgi vesicle-mediated transport and others

involved in ER to Golgi vesicle-mediated transport [26]

YFR051C

RET2

ER to Golgi vesicle-mediated transport and others

interacts with Bre5, Hsc82, Hsp92 [3133] which are involved in protein processing

YNL151C

RPC31

transcription from RNA polymerase III promoter

interacts with Mms1, Shp1, Ubi4, regulating ubiquitination [34, 35]

YJR102C

VPS25

ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway and others

involved in ubiquitin-dependent protein catabolism [36]