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Table 3 Gene Ontology analysis of CREB HaloCHIP-chip promoters.

From: A functional analysis of the CREB signaling pathway using HaloCHIP-chip and high throughput reporter assays

Cellular Functions

Number of Promoters

p-value

Histone Assembly

12 of 65

1.26E-06

Chromatin architecture

20 of 261

7.63E-07

Ribonucleic Complexes

26 of 392

7.06E-07

RNA processing

26 of 395

8.01E-07

DNA metabolism

38 of 638

2.93E-08

Nucleic acid binding

110 of 2764

2.19E-09

  1. The Top 1% of the CREB HaloCHIP-chip promoters (277) was analyzed using Gene Ontology (GO) and the different categories in terms of cellular function of promoters within the Top1%. Also shown is the number of CREB HaloCHIP-chip promoters found as compared to the number of known human promoters within each category and the corresponding p-value calculated by GO.
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BMC Genomics

ISSN: 1471-2164

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