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Table 4 Differentially expressed miRNAs between infected and non-infected tracheae (P < 0.05, Q < 0.05 and Ratio > 2)

From: Identification of differentially expressed miRNAs in chicken lung and trachea with avian influenza virus infection by a deep sequencing approach

miRNA Position on chromosomes Reads in infected Reads in non-infected Ratio infected/non-infected (Normalized)
gga-mir-1a-2 chr2: 105673483- 10567356 11423 441 9.34
gga-mir-1a-1 chr20: 8107831- 8107901 10438 405 9.29
gga-mir-455-3p chr17:6021890-6021975 29 2 5.23
gga-mir-455-5p chr17:6021890-6021975 29 2 5.23
gga-mir-34b chr24: 5684900-5684983 870 82 3.82
gga-mir-499 chr20: 2599334-2599424 154 15 3.70
gga-mir-34c chr24: 5685637-5685710 540 64 3.04
gga-mir-140 chr11: 21030641-21030735 2334 383 2.20
gga-mir-1b chr23: 4663912-4663975 66 11 2.16
gga-mir-456 chr3: 32679710-32679821 37 28 0.48
gga-mir-125b chr1: 102457647-102457736 31 24 0.47
gga-mir-148a chr2: 32053543-32053610 116 94 0.44
gga-let-7b chr1: 73422101-73422185 1761 1460 0.43
gga-mir-181a-1 chr8: 2001561-2001664 59 49 0.43
gga-mir-146c chr4: 92169271- 92169399 42 36 0.42
gga-mir-181a-2 chr17: 10218497-10218587 51 45 0.41
gga-let-7g chr12: 2809078-2809160 413 373 0.40
gga-mir-206 chr3: 110390439-110390514 95 88 0.39
gga-mir-222 chr1: 114216027-114216124;
chr1: 114218422-114218519
14 13 0.39
gga-let-7k chr26: 1442897-1442979 58 54 0.39
gga-mir-181b-2 chr17: 10220137- 10220221 20 21 0.34
gga-let-7i chr1: 34895687-34895770 123 136 0.33
gga-mir-126 chr17: 8431742-8431825 17 19 0.32
gga-mir-99a chr1: 102424333-102424413 14 16 0.32
gga-mir-30a-3p chr3: 85102239- 85102310 66 76 0.31
gga-mir-30a-5p chr3: 85102239- 85102310 74 87 0.31
gga-mir-146b chr6: 24570060-24570164 78 107 0.26
gga-mir-181b-1 chr8: 2001750-2001838 18 25 0.26
gga-mir-30d chr2: 148337263-148337326 46 68 0.24
gga-mir-100 chr21: 3372894-3372973 25 41 0.22
gga-mir-92 chr1: 152248070-152248070 24 40 0.22
gga-mir-15a chr1: 173700493-173700575 3 9 0.12
gga-mir-451 chr19: 5823968-5824036 14 89 0.06
gga-mir-10a chrun_random: 379304-379377 11 139 0.03
gga-mir-1612 chr9: 6031748-6031831 0 9 -1
gga-mir-1458 chr9: 11743528-11743637 0 7 -
  1. Note: 1 Specifically expressed in non-infected tracheae.