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Table 5 Differentially expressed miRNAs between infected lungs and tracheae (P < 0.05, Q < 0.05 and Ratio > 2)

From: Identification of differentially expressed miRNAs in chicken lung and trachea with avian influenza virus infection by a deep sequencing approach

miRNA Position on chromosomes Reads in lungs Reads in tracheae Ratio lung/trachea (Normalized)
gga-mir-1599 chr7: 25926968-25927029 48 0 -1
gga-mir-1612 chr9: 6031748-6031831 39 0 -
gga-mir-1701 chr4: 82234261-82234337 27 0 -
gga-mir-1458 chr9: 11743528-11743637 25 0 -
gga-mir-1793 chr9: 25115521-25115617 23 0 -
gga-mir-181b-2 chr17: 10220137- 10220221 20 0 -
gga-mir-1416 chrZ: 34596479-34596567 17 0 -
gga-mir-7-1 chrZ: 8107831-8107901 16 0 -
gga-mir-7b chr1: 73422101-73422185 15 0 -
gga-mir-1638 chr5: 58712377- 58712463 13 0 -
gga-mir-144 chr19: 5824123-5824207 11 0 -
gga-mir-1761 chr8: 17523212-17523292 9 0 -
gga-mir-1576 chr13:18532632-18532726 8 0 -
gga-mir-1814 chr4: 61722590-61722663 8 0 -
gga-mir-1452 chrZ: 8107831-8107901 7 0 -
gga-mir-1815 chr6: 29566734-29566810 7 0 -
gga-mir-122-1 chrZ: 649337-649413 6 0 -
gga-mir-122-2 chrurn_random: 12066796-12066872 6 0 -
gga-mir-1636 chr15: 4729959-4730046 6 0 -
gga-mir-1659 chr7: 14764187-14764287 6 0 -
gga-mir-1786 chr14: 7801714-7801822 6 0 -
gga-mir-218-1 chr4: 77774698-77774806 5 0 -
gga-mir-218-3   5 0 -
gga-mir-7-2 chr10: 14823525-14823623 5 0 -
gga-mir-1467 chr2: 141373919-141374028 4 0 -
gga-mir-1630 chr9: 1883593-1883649 4 0 -
gga-mir-1816 chr2: 90603851-90603955 4 0 -
gga-mir-7-3 chr28: 4436025-4436119 4 0 -
gga-mir-10a chrun_random: 379304-379377 86 11 19.81
gga-mir-451 chr19: 5823968-5824036 93 14 16.83
gga-mir-184 chr10: 22146245-22146318 11 3 9.29
gga-mir-193b chr14: 759453-759535 11 3 9.29
gga-mir-181a-2 chr17: 10218497-10218587 57 18 8.02
gga-mir-205a chr26: 2896047-2896142 6 2 7.60
gga-mir-92 chr1: 152248070-152248070 42 24 4.43
gga-mir-99a chr1: 102424333-102424413 23 14 4.16
gga-mir-126 chr17: 8431742-8431825 25 17 3.73
gga-let-7i chr1: 34895687-34895770 177 123 3.65
gga-mir-146b chr6: 24570060-24570164 102 78 3.31
gga-mir-30d chr2: 148337263-148337326 60 46 3.30
gga-mir-181a-1 chr8: 2001561-2001664 65 51 3.23
gga-let-7b chr1: 73422101-73422185 2008 1761 2.89
gga-mir-206 chr3: 110390439-110390514 101 95 2.69
gga-mir-148a chr2: 32053543-32053610 114 116 2.49
gga-mir-30a-5p chr3: 85102239- 85102310 68 74 2.33
gga-let-7k chr26: 1442897-1442979 53 58 2.32
gga-mir-30a-3p chr3: 85102239- 85102310 58 66 2.23
gga-mir-30e chr23: 5248414-5248509 20 23 2.20
gga-let-7g chr12: 2809078-2809160 342 413 2.10
gga-mir-456 chr3: 32679710-32679821 30 37 2.05
gga-mir-103-2 chr4: 91906889-91906971 65 82 2.01
gga-mir-1b chr23: 4663912-4663975 10 66 0.38
gga-mir-34b chr24: 5684900-5684983 112 870 0.37
gga-mir-34c chr24: 5685637-5685710 78 540 0.37
gga-mir-499 chr20: 2599334-2599424 13 154 0.21
gga-mir-1a-1 chr20: 8107831- 8107901 551 10438 0.13
gga-mir-1a-2 chr2: 105673483- 10567356 593 11423 0.13
  1. Note: 1 Specifically expressed in infected lungs.