Name 1, 2 | mirBase Name | Sequence 3 | Contig 4 | Start 4 | End 4 | Strand | Embryo 5 | Gut_SF 5 | Gut_BF 5 |
---|---|---|---|---|---|---|---|---|---|
aae-miR-M1-1 | aae-miR-2943-1 | TTAAGTAGGCACTTGCAGGCAAA | CONTIG_15246 | 25749 | 25829 | + | 28 | 0 | 0 |
aae-miR-M1-2 | aae-miR-2943-2 | TTAAGTAGGCACTTGCAGGCAAA | CONTIG_15246 | 25911 | 25981 | + | 28 | 0 | 0 |
aae-miR-M2 | aae-miR-2942 | TATTCGAGACTTCACGAGTTAAT | CONTIG_11944 | 151669 | 151750 | + | 0 | 0 | 7 |
aae-miR-M3 | aae-miR-2945 | TGACTAGAGGCAGACTCGTTTA | CONTIG_2929 | 123975 | 124056 | + | 33 | 0 | 6 |
aae-miR-M3* | aae-miR-2945* | AGCGGGTCCGTTTCTAGTGTCATG | CONTIG_2929 | 123975 | 124056 | + | 3 | 0 | 0 |
aae-miR-M4a | aae-miR-2944a | GAAGGAACTTCTGCTGTGATCTGA | CONTIG_18252 | 93868 | 93929 | + | 91 | 2 | 0 |
aae-miR-M4a* | aae-miR-2944a* | TATCACAGTAGTTGTACTTTAA | CONTIG_18252 | 93868 | 93929 | + | 3 | 0 | 0 |
aae-miR-M4b | aae-miR-2944b | GAAGGAACTCCCGGTGTGATATA | CONTIG_18252 | 93731 | 93792 | + | 62 | 0 | 0 |
aae-miR-M4b* | aae-miR-2944b* | TATCACAGCAGTAGTTACCTGA | CONTIG_18252 | 93731 | 93792 | + | 24 | 0 | 0 |
aae-miR-N1-1 | aae-miR-2941-2 | TAGTACGGCTAGAACTCCACGGA | CONTIG_16241 | 318005 | 318105 | - | 288 | 1 | 1 |
aae-miR-N1-2 | aae-miR-2941-1 | TAGTACGGCTAGAACTCCACGGA | CONTIG_16241 | 317700 | 317799 | - | 288 | 1 | 1 |
aae-miR-N2 | aae-miR-2946 | TAGTACGGAAAAGATATGGGGA | CONTIG_16241 | 318135 | 318222 | - | 5 | 0 | 0 |
aae-miR-1174 | aae-miR-1174 | TCAGATCTACTTAATACCCAT | CONTIG_7232 | 17531 | 17665 | + | Â | Â | Â |
aae-miR-1175 | aae-miR-1175 | TGAGATTCTACTTCTCCGACTTAA | CONTIG_7232 | 17737 | 17816 | + | 0 | 0 | 1 |
aae-miR-1175* | aae-miR-1175* | TAAGTGGAGTAGTGGTCTCATCGCT | CONTIG_7232 | 17737 | 17816 | + | 0 | 2 | 59 |
aae-miR-1890 | aae-miR-1890 | TGAAATCTTTGATTAGGTCT GG | CONTIG_10435 | 60786 | 60931 | + | 1 | 0 | 0 |
aae-miR-1891-1 | aae-miR-1891-1 | TGAGGAGTTAATTTGCGTGTTT | CONTIG_10244 | 3984 | 4069 | - | 2 | 0 | 0 |
aae-miR-1891-2 | aae-miR-1891-2 | TGAGGAGTTAATTTGCGTGTTT | CONTIG_18287 | 4656 | 4741 | + | 2 | 0 | 0 |
aae-miR-1889 | aae-miR-1889 | CACGTTACAGATTGGGGTTTCC | CONTIG_4323 | 23786 | 23921 | - | 0 | 0 | 3 |
aae-bantam | aae-bantam | TGAGATCATTTTGAAAGCTGATT | CONTIG_3301 | 208288 | 208426 | - | 1 | 2 | 2 |
aae-let-7 | aae-let-7 | TGAGGTAGTTGGTTGTATAGT | CONTIG_2929 | 321614 | 321684 | + | 0 | 0 | 5 |
aae-miR-1 | aae-miR-1 | TGGAATGTAAAGAAGTATGGAG | CONTIG_25061 | 66256 | 66338 | + | 1 | 0 | 1 |
aae-miR-10 | aae-miR-10 | ACCCTGTAGATCCGAATTTGTT | CONTIG_17639 | 8749 | 8833 | + | 1 | 0 | 0 |
aae-miR-100 | aae-miR-100 | AACCCGTAGATCCGAACTTGTG | CONTIG_2929 | 307441 | 307568 | + | Â | Â | Â |
aae-miR-1000-1 | aae-miR-1000-1 | ATATTGTCCTGTCACAGCAGT | CONTIG_35246 | 172 | 265 | - | Â | Â | Â |
aae-miR-1000-2 | aae-miR-1000-2 | ATATTGTCCTGTCACAGCAGT | CONTIG_9774 | 12985 | 13078 | + | Â | Â | Â |
aae-miR-11 | aae-miR-11 | CATCACAGTCTGAGTTCTTGCTT | CONTIG_23911 | 46399 | 46488 | + | 1861 | 42 | 436 |
aae-miR-11* | aae-miR-11* | CGAGAACTCCGGCTGTGACCTGTG | CONTIG_23911 | 46399 | 46488 | + | 4 | 0 | 2 |
aae-miR-12 | aae-miR-12 | TGAGTATTACATCAGGTACTGGT | CONTIG_4323 | 23386 | 23503 | - | Â | Â | Â |
aae-miR-124 | aae-miR-124 | TAAGGCACGCGGTGAATGCCAAG | CONTIG_531 | 21343 | 21423 | - | 3 | 0 | 0 |
aae-miR-125 | aae-miR-125 | TCCCTGAGACCCTAACTTGTGA C | CONTIG_2929 | 321885 | 321975 | + | 0 | 0 | 3 |
aae-miR-133 | aae-miR-133 | TTGGTCCCCTTCAACCAGCTGT | CONTIG_24522 | 50243 | 50347 | - | Â | Â | Â |
aae-miR-137-1 | aae-miR-137-1 | TTATTGCTTGAGAATACACGTA | CONTIG_7773 | 15414 | 15486 | - | Â | Â | Â |
aae-miR-137-2 | aae-miR-137-2 | TTATTGCTTGAGAATACACGTA | CONTIG_29705 | 92457 | 92529 | + | Â | Â | Â |
aae-miR-13b | aae-miR-13 | TATCACAGCCATTTTGACGAGTT | CONTIG_12793 | 17619 | 17710 | - | 168 | 2 | 42 |
aae-miR-14 | aae-miR-14 | TCAGTCTTTTTCTCTCTCCTAT | CONTIG_12112 | 693 | 785 | - | 1 | 1 | 6 |
aae-miR-184 | aae-miR-184 | TGGACGGAGAACTGATAAGGGC | CONTIG_19030 | 3452 | 3535 | - | 957 | 76 | 1307 |
aae-miR-190 | aae-miR-190 | AGATATGTTTGATATTCTTGGTTG | CONTIG_10108 | 2092 | 2180 | - | 83 | 2 | 43 |
aae-miR-193 | aae-miR-193 | TACTGGCCTACTAAGTCCCAAC | CONTIG_19568 | 51035 | 51158 | + | Â | Â | Â |
aae-miR-2a | aae-miR-2a | TATCACAGCCAGCTTTGATGAGCT | CONTIG_12793 | 16130 | 16216 | - | 1217 | 80 | 249 |
aae-miR-210 | aae-miR-210 | TTGTGCGTGTGACAACGGCTAT | CONTIG_19443 | 85221 | 85292 | - | 3 | 12 | 12 |
aae-miR-219 | aae-miR-219 | TGATTGTCCAAACGCAATTCTTG | CONTIG_15776 | 56993 | 57078 | + | Â | Â | Â |
aae-miR-2b | aae-miR-2b | TATCACAGCCAGCTTTGAAGAGCG | CONTIG_12793 | 17471 | 17562 | - | 758 | 74 | 147 |
aae-miR-2c | aae-miR-2c | TATCACAGCCAGCTTTGATGAGC | CONTIG_12793 | 17971 | 18048 | - | 1218 | 80 | 249 |
aae-miR-252 | aae-miR-252 | CTAAGTACTAGTGCCGCAGGAGA | CONTIG_3685 | 79002 | 79177 | - | 38 | 0 | 1 |
aae-miR-252* | aae-miR-252* | CCTGCTGCCCAAGTGCTTATCGAA | CONTIG_3685 | 79002 | 79177 | - | 5 | 0 | 0 |
aae-miR-263 | aae-miR-263a | AATGGCACTGGAAGAATTCACGGG | CONTIG_27430 | 4746 | 4821 | - | 53 | 1 | 1 |
aae-miR-263* | aae-miR-263a* | CGTGTTCTGGCAGTGGCATCCC | CONTIG_27430 | 4746 | 4821 | - | 6 | 0 | 0 |
aae-miR-263b | aae-miR-263b | CTTGGCACTGGGAGAATTCACAG | CONTIG_1908 | 33267 | 33357 | + | 6 | 0 | 0 |
aae-miR-263b* | aae-miR-263b* | TGGATCTTTTCGTGCCATCGT | CONTIG_1908 | 33267 | 33357 | + | 1 | 0 | 0 |
aae-miR-275 | aae-miR-275 | TCAGGTACCTGAAGTAGCGCGCG | CONTIG_1651 | 96625 | 96720 | + | 0 | 0 | 5 |
aae-miR-275* | aae-miR-275* | CGCGCTAAGCAGGAACCGAGACT | CONTIG_1651 | 96625 | 96720 | + | 1 | 0 | 6 |
aae-miR-276-1 | aae-miR-276-1 | TAGGAACTTCATACCGTGCTCT | CONTIG_417 | 10988 | 11177 | - | Â | Â | Â |
aae-miR-276-2 | aae-miR-276-2 | TAGGAACTTCATACCGTGCTCT | CONTIG_7617 | 38953 | 39087 | + | Â | Â | Â |
aae-miR-277 | aae-miR-277 | TAAATGCACTATCTGGTACGACA | CONTIG_12646 | 3556 | 3644 | + | Â | Â | Â |
aae-miR-278 | aae-miR-278 | TCGGTGGGACTTTCGTCCGTTT | CONTIG_1172 | 33037 | 33128 | + | 6 | 0 | 2 |
aae-miR-279 | aae-miR-279 | TGACTAGATCCACACTCATTAA | CONTIG_17556 | 116934 | 117006 | - | 26 | 0 | 2 |
aae-miR-281 | aae-miR-281 | CTGTCATGGAATTGCTCTCTTTA | CONTIG_27100 | 34036 | 34204 | + | 1 | 16 | 50 |
aae-miR-281* | aae-miR-281* | AAAGAGAGCTATCCGTCGACAGTA | CONTIG_27100 | 34036 | 34204 | + | 164 | 5686 | 4806 |
aae-miR-282-1 | aae-miR-282-1 | AATCTAGCCTCTCCTAGGCTTTGTCTG | CONTIG_15805 | 19414 | 19548 | + | Â | Â | Â |
aae-miR-282-1* | aae-miR-282-1* | ACATAGCCTGACAGAGGTTAGG | CONTIG_15805 | 19414 | 19548 | + | 2 | 0 | 0 |
aae-miR-282-2 | aae-miR-282-2 | AATCTAGCCTCTCCTAGGCTTTGTCTG | CONTIG_15982 | 5479 | 5613 | - | Â | Â | Â |
aae-miR-282-2* | aae-miR-282-2* | ACATAGCCTGACAGAGGTTAGG | CONTIG_15982 | 5479 | 5613 | - | 2 | 0 | 0 |
aae-miR-283 | aae-miR-283 | CAATATCAGCTGGTAATTCTGG G | CONTIG_4323 | 32334 | 32426 | - | 6 | 1 | 131 |
aae-miR-285 | aae-miR-285 | TAGCACCATTCGAAATCAGT | CONTIG_1634 | 212427 | 212492 | - | 0 | 1 | 0 |
aae-miR-286a-1 | aae-miR-286b-1 | TGACTAGACCGAACACTCGTATCC | CONTIG_21241 | 18407 | 18503 | + | 8 | 0 | 0 |
aae-miR-286a-2 | aae-miR-286b-2 | TGACTAGACCGAACACTCGTATCC | CONTIG_8291 | 17656 | 17752 | + | 8 | 0 | 0 |
aae-miR-286b | aae-miR-286a | TGACTAGACCGAACACTCGCGTC CT | CONTIG_18252 | 93413 | 93509 | + | 10 | 0 | 0 |
aae-miR-305 | aae-miR-305 | ATTGTACTTCATCAGGTGCTCTGG | CONTIG_1651 | 105677 | 105766 | + | 0 | 0 | 2 |
aae-miR-305* | aae-miR-305* | CGGCACATGTTGGAGTACACTTAA | CONTIG_1651 | 105677 | 105766 | + | 0 | 0 | 7 |
aae-miR-306 | aae-miR-306 | TCAGGTACTGAGTGACTCTCAG | CONTIG_24640 | 55004 | 55128 | + | 119 | 0 | 27 |
aae-miR-307 | aae-miR-307 | TCACAACCTCCTTGAGTGAGCGA | CONTIG_1157 | 147943 | 148043 | - | 1 | 0 | 0 |
aae-miR-308 | aae-miR-308 | AATCACAGGAGTATACTGTGAG | CONTIG_6324 | 6462 | 6528 | + | Â | Â | Â |
aae-miR-308* | aae-miR-308* | CGCGGTATATTCTTGTGGCTTGA | CONTIG_6324 | 6462 | 6528 | + | 2 | 0 | 0 |
aae-miR-31 | aae-miR-31 | TGGCAAGATGTTGGCATAGCTGAAA | CONTIG_21960 | 98153 | 98301 | - | 1 | 0 | 3 |
aae-miR-315 | aae-miR-315 | TTTTGATTGTTGCTCAGAAAGCC | CONTIG_21501 | 12498 | 12562 | + | 27 | 1 | 0 |
aae-miR-315* | aae-miR-315* | CTTTCGAGCAGTAATCAAAGTc | CONTIG_21501 | 12498 | 12562 | + | 5 | 0 | 0 |
aae-miR-316 | aae-miR-316 | TGTCTTTTTCCGCTTACTGCCG | CONTIG_13460 | 10738 | 10828 | - | 0 | 0 | 1 |
aae-miR-317-1 | aae-miR-317-1 | TGAACACAGCTGGTGGTATCTCAGT | CONTIG_12640 | 88437 | 88524 | + | 36 | 38 | 737 |
aae-miR-317-2 | aae-miR-317-2 | TGAACACAGCTGGTGGTATCTCAGT | CONTIG_8451 | 9550 | 9637 | - | 36 | 38 | 737 |
aae-miR-3a-1 | aae-miR-309a-1 | TCACTGGGCAAAGTTTGTCGCA | CONTIG_21241 | 18967 | 19043 | + | 6 | 0 | 0 |
aae-miR-3a-2 | aae-miR-309a-2 | TCACTGGGCAAAGTTTGTCGCA | CONTIG_8291 | 18216 | 18292 | + | 6 | 0 | 0 |
aae-miR-3b | aaw-miR-309b | TCACTGGGCATAGTTTGTCGCA | CONTIG_18252 | 94047 | 94117 | + | 3 | 0 | 0 |
aae-miR-3b* | aae-miR-309b* | CGTCAAACTCCGTTCAGTTGGTG | CONTIG_18252 | 94047 | 94117 | + | 1 | 0 | 0 |
aae-miR-33 | aae-miR-33 | GTGCATTGTAGTTGCATTGCA | CONTIG_18815 | 108787 | 108866 | + | Â | Â | Â |
aae-miR-34 | aae-miR-34 | TGGCAGTGTGGTTAGCTGGTTGTG | CONTIG_12646 | 4278 | 4400 | + | 44 | 55 | 639 |
aae-miR-375 | aae-miR-375 | TTTGTTCGTTTGGCTCGAGTTA | CONTIG_14081 | 238834 | 238944 | - | 1 | 0 | 0 |
aae-miR-7 | aae-miR-7 | TGGAAGACTAGTGATTTTGTTGTT | CONTIG_31115 | 46028 | 46112 | + | 14 | 0 | 0 |
aae-miR-71 | aae-miR-71 | AGAAAGACATGGGTAGTGAGATA | CONTIG_12793 | 18215 | 18396 | - | 39 | 2 | 7 |
aae-miR-71* | aae-miR-71* | TCTCACTACCTTGTCTTTCATG | CONTIG_12793 | 18215 | 18396 | - | 6 | 0 | 0 |
aae-miR-79 | aae-miR-79 | ATAAAGCTAGATTACCAAAGCAT | CONTIG_24640 | 55215 | 55284 | + | 2 | 0 | 0 |
aae-miR-8 | aae-miR-8 | TAATACTGTCAGGTAAAGATGTC | CONTIG_16942 | 34594 | 34660 | + | 32 | 1 | 38 |
aae-miR-8* | aae-miR-8* | CATCTTACCGGGCAGCATTAGA | CONTIG_16942 | 34594 | 34660 | + | 7 | 2 | 4 |
aae-miR-87 | aae-miR-87 | GGTGAGCAAATTTTCAGGTGT | CONTIG_15587 | 30157 | 30251 | + | Â | Â | Â |
aae-miR-927 | aae-miR-927 | TTTAGAATTCCTACGCTTTACC | CONTIG_1795 | 170460 | 170534 | + | Â | Â | Â |
aae-miR-929-1 | aae-miR-929-1 | ATTGACTCTAGTAGGGAGTCC | CONTIG_12461 | 76647 | 76734 | - | Â | Â | Â |
aae-miR-929-2 | aae-miR-929-2 | ATTGACTCTAGTAGGGAGTCC | CONTIG_34315 | 3294 | 3381 | + | Â | Â | Â |
aae-miR-92a | aae-miR-92a | TATTGCACTTGTCCCGGCCTAT | CONTIG_6821 | 67755 | 67832 | + | 74 | 0 | 5 |
aae-miR-92a* | aae-miR-92a* | CGGTACGGACAGGGGCAACATT | CONTIG_6821 | 67755 | 67832 | + | 6 | 0 | 0 |
aae-miR-92b | aae-miR-92b | AATTGCACTTGTCCCGGCCTGC | CONTIG_6824 | 4049 | 4131 | + | 74 | 0 | 5 |
aae-miR-92b* | aae-miR-92b* | AGGTCGTGACTTGTGCCCGTTTG | CONTIG_6824 | 4049 | 4131 | + | 12 | 0 | 0 |
aae-miR-932 | aae-miR-932 | TCAATTCCGTAGTGCATTGCAG | CONTIG_28378 | 72232 | 72319 | - | Â | Â | Â |
aae-miR-957 | aae-miR-957 | TGAAACCGTCCAAAACTGAGGC | CONTIG_591 | 147619 | 147787 | + | Â | Â | Â |
aae-miR-965 | aae-miR-965 | TAAGCGTATAGCTTTTCCC | CONTIG_3410 | 87378 | 87524 | + | Â | Â | Â |
aae-miR-970 | aae-miR-970 | TCATAAGACACACGCGGCTAT | CONTIG_11324 | 29252 | 29338 | + | 1 | 0 | 3 |
aae-miR-981 | aae-miR-981 | TTCGTTGTCGACGAAACCTGCA | CONTIG_7302 | 184768 | 184853 | - | Â | Â | Â |
aae-miR-988 | aae-miR-988 | CCCCTTGTTGCAAACCTCACGC | CONTIG_17684 | 77966 | 78086 | - | 3 | 0 | 1 |
aae-miR-988* | aae-miR-988* | GTGTGCTTTGTGACAATGAGA | CONTIG_17684 | 77966 | 78086 | - | 2 | 0 | 2 |
aae-miR-989 | aae-miR-989 | TGTGATGTGACGTAGTGGTAC | CONTIG_6774 | 51048 | 51137 | - | 2 | 33 | 3 |
aae-miR-993 | aae-miR-993 | GAAGCTCGTTTCTATAGAGGTATCT | CONTIG_28305 | 82579 | 82660 | + | Â | Â | Â |
aae-miR-996 | aae-miR-996 | TGACTAGATTACATGCTCGTCT | CONTIG_17556 | 112174 | 112267 | - | Â | Â | Â |
aae-miR-998 | aae-miR-998 | TAGCACCATGAGATTCAGCTC | CONTIG_23911 | 46676 | 46764 | + | 164 | 6 | 42 |
aae-miR-999 | aae-miR-999 | TGTTAACTGTAAGACTGTGTCT | CONTIG_6027 | 163128 | 163269 | + | Â | Â | Â |
aae-miR-9a-1 | aae-miR-9a-1 | TCTTTGGTTATCTAGCTGTATGA | CONTIG_19539 | 116871 | 116951 | + | 16 | 1 | 2 |
aae-miR-9a-2 | aae-miR-9a-2 | TCTTTGGTTATCTAGCTGTATGA | CONTIG_19541 | 4061 | 4141 | + | 16 | 1 | 2 |
aae-miR-9b | aae-miR-9b | TCTTTGGTGATTTTAGCTGTATGC | CONTIG_24640 | 55513 | 55604 | + | 134 | 0 | 69 |
aae-miR-9c | aae-miR-9c | TCTAAAGCTTTAGTACCAGAGGTC | CONTIG_24640 | 28160 | 28257 | + | 5 | 0 | 0 |
aae-miR-iab-4-1 | aae-miR-iab-4-1 | CGGTATACCTTCAGTATACGTAAC | CONTIG_17255 | 44653 | 44726 | - | Â | Â | Â |
aae-miR-iab-4-2 | aae-miR-iab-4-2 | CGGTATACCTTCAGTATACGTAAC | CONTIG_23219 | 23581 | 23654 | + | Â | Â | Â |