Correct class | Correct role | Correct function | Single domain | N | Percent |
|---|
Yes | Yes | Yes | NA | 1702 | 23 |
Yes | No | Yes | NA | 569 | 8 |
No | Yes | NA | NA | 2339 | 32 |
No | No | Yes | NA | 1185 | 16 |
No | No | Almosta | NA | 196 | 3 |
No | No | No | Yes | 105 | 1 |
No | No | No | No | 1155 | 16 |
Sums
| | | 7251 | 100 |
- GenBank definitions of proteins in RNRdb. Four different aspects of RNR functional annotation have been investigated: RNR class, protein role (subunit identity), general function (involved with ribonucleotides) and single domain identification (the ATP cone [35] that regulates activity in many enzymatic subunits). Only NCBI entries for full-length sequences were used, and nine sequences that were difficult to classify were excluded. NA, not applicable.
- a Proteins annotated such that they contain the string "ribonucl" for all RNR proteins, or "repressor" for NrdR, but not a full description of the function such that they would classify as correctly functionally annotated, have been classified as almost correctly annotated with respect to function.
