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Table 1 Microsatellite loci PCR screen results categorized by repeat motif.

From: Genome-based polymorphic microsatellite development and validation in the mosquito Aedes aegypti and application to population genetics in Haiti

Repeat

Polymorphic (n = 33)

Monomorphic (n = 3)

Strain-specific amplification (n = 8)

Multiple copies (n = 28)

No amplification (n = 3)

Single nucleotide repeats

     

A/T

  

2

1

 

Dinucleotide repeats

     

AG/TC

1

  

2

 

AT/TA

2

1

1

9

1

CA/GT

1

 

1

1

1

CT/GA

4

  

1

 

TG/AC

1

    

Trinucleotide repeats

     

AAC/TTG

1

    

AAG/TTC

1

  

2

 

AAT/TTA

2

    

ACG/TGC

2

    

ATA/TAT

1

    

ATC/TAG

   

2

1

ATG/TAC

1

    

ATT/TAA

1

 

1

  

CAA/GTT

  

1

  

CAG/GTC

   

1

 

CAT/GTA

1

  

1

 

CCA/GGT

 

1

   

CGA/GCT

1

 

1

1

 

CGT/GCA

2

    

CTA/GAT

 

1

 

2

 

CTT/GAA

3

  

1

 

GAC/CTG

1

  

1

 

TGA/ACT

1

    

Four or more nucleotide repeats

     

AATA/TTAT

  

1

1

 

ATCC/TAGG

1

    

ATGG/TACC

1

    

ATTT/TAAA

3

    

TGTA/ACAT

1

    

TTTA/AAAT

   

1

 

TGGACT/ACCTGA

   

1

 
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