Table 4 Down-regulated known genes in late stage EECs.

211224_s_at

Hs.158316

ATP-binding cassette, sub-family B, 11

ABCB11

chr2q24

232948_at

Hs.444414

AF4/FMR2 family, member 3

AFF3

chr2q11.2-q12

207133_x_at

Hs.99691

alpha-kinase 1

ALPK1

chr4q25

1562271_x_at

Hs.508738

Rho guanine nucleotide exchange factor 7

ARHGEF7

chr13q34

243899_at

Hs.579108

ADP-ribosylation factor-like 17 pseudogene 1

ARL17P1

chr17q21.32

211076_x_at

Hs.143766

Atrophin 1

ATN1

chr12p13.31

214256_at

Hs.128041

ATPase, Class V, type 10A

ATP10A

chr15q11.2

237716_at

Hs.434253

Chromosome 9 open reading frame 3

C9orf3

chr9q22.32

233844_at

Hs.522805

CD99 molecule-like 2

CD99L2

chrXq28

243640_x_at

Hs.127411

CDC14 cell division cycle 14 homolog A

CDC14A

chr1p21

233630_at

Hs.472027

CDP-diacylglycerol synthase 2

CDS2

chr20p13

210701_at

Hs.461361

craniofacial development protein 1

CFDP1

chr16q22.2-q22.3

238863_x_at

Hs.130849

Component of oligomeric golgi complex 8

COG8

chr16q22.1

215377_at

Hs.501345

C-terminal binding protein 2

CTBP2

chr10q26.13

1561616_a_at

Hs.591570

dynein, axonemal, heavy polypeptide 6

DNAH6

chr2p11.2

1560042_at

Hs.591566

family with sequence similarity 82, A

FAM82A

chr2p22.2

243588_at

Hs.403917

FERM, RhoGEF & pleckstrin domain protein 1

FARP1

chr13q32.2

243876_at

Hs.189409

Formin binding protein 1

FNBP1

chr9q34

1560094_at

Hs.155090

Guanine nucleotide binding protein, β 5

GNB5

chr15q21.2

210855_at

Hs.467733

GREB1 protein

GREB1

chr2p25.1

1557289_s_at

Hs.334930

GTF2I repeat domain containing 2

GTF2IRD2

chr7q11.23

232889_at

Hs.620129

glucuronidase, beta pseudogene 1

GUSBP1

chr5q13.2

1555685_at

Hs.463511

Hexose-6-phosphate dehydrogenase

H6PD

chr1p36

240482_at

Hs.519632

Histone deacetylase 3

HDAC3

chr5q31

1559600_at

Hs.632767

Hypermethylated in cancer 2

HIC2

chr22q11.21

1557329_at

Hs.371350

Holocarboxylase synthetase

HLCS

chr21q22.1

1553111_a_at

Hs.534040

kelch repeat and BTB domain containing 6

KBTBD6

chr13q14.11

231875_at

Hs.374201

kinesin family member 21A

KIF21A

chr12q12

232814_x_at

Hs.20107

Kinesin 2

KNS2

chr14q32.3

242112_at

Hs.631954

LSM11, U7 small nuclear RNA associated

LSM11

chr5q33.3

232418_at

Hs.30824

leucine zipper transcription factor-like 1

LZTFL1

chr3p21.3

1560033_at

Hs.167531

Methylcrotonoyl-Coenzyme A carboxylase 2

MCCC2

chr5q12-q13

216783_at

Hs.187866

Neuroplastin

NPTN

chr15q22

217802_s_at

Hs.632458

nuclear casein kinase and CDK substrate 1

NUCKS1

chr1q32.1

232644_x_at

Hs.518750

OCIA domain containing 1

OCIAD1

chr4p11

233270_x_at

Hs.491148

Pericentriolar material 1

PCM1

chr8p22-p21.3

1558695_at

Hs.188614

Pleckstrin homology domain containing, A5

PLEKHA5

chr12p12

233458_at

Hs.460298

polymerase (RNA) III polypeptide E

POLR3E

chr16p12.1

1566541_at

Hs.580351

Protein kinase C, epsilon

PRKCE

chr2p21

235004_at

Hs.519904

RNA binding motif protein 24

RBM24

chr6p22.3

212044_s_at

Hs.523463

Ribosomal protein L27a

RPL27A

chr11p15

215599_at

Hs.535014

SMA4

SMA4

chr5q13

1556784_at

Hs.551967

Smith-Magenis syndrome region, candidate 7

SMCR7

chr17p11.2

217704_x_at

Hs.628886

Suppressor of zeste 12 homolog pseudogene

SUZ12P

chr17q11.2

215279_at

Hs.499209

Supervillin

SVIL

chr10p11.2

207365_x_at

Hs.435667

thyroid hormone receptor, beta

THRB

chr3p24.2

215428_at

Hs.510833

Tight junction protein 1 (zona occludens 1)

TJP1

chr15q13

225004_at

Hs.514211

transmembrane protein 101

TMEM101

chr17q21.31

242347_at

Hs.8752

Transmembrane protein 4

TMEM4

chr12q15

238079_at

Hs.576468

tropomyosin 3

TPM3

chr1q21.2

237513_at

Hs.98609

trypsin X3

TRY1

chr7q34

1557571_at

Hs.439381

Vacuolar protein sorting 13 homolog D

VPS13D

chr1p36.22

235551_at

Hs.248815

WD repeat domain 4

WDR4

chr21q22.3

1555259_at

Hs.444451

sterile alpha motif and leucine zipper kinase AZK

ZAK

chr2q24.2