Table 1 Expression-based confirmation of previously predicted miRNAs in pig.

ssc-let-7c

UGAGGUAGUAGGUUGUAUGGUU

63

hsa, mmu, rno, gga, dre, xtr, sme, bta, odi, cin, csa, mml, cfa

ssc-let-7f

UGAGGUAGUAGAUUGUAUAGUU

18

hsa, mmu, rno, gga, dre, xtr, bta, mdo, mml, cfa

ssc-let-7i

UGAGGUAGUAGUUUGUGCU

9

mmu, hsa, rno, gga, dre, fru, tni, xtr, bta, mdo, mml

ssc-miR-106a

AAAAGUGCUUACAGUGCAGGUAGC

2

hsa, mmu, ggo, age, ppa, mml, ppy, ptr, sla, mne, cfa

ssc-miR-122

UGGAGUGUGACAAUGGUGUUUGU

126

bta, mmu, hsa, rno, gga, dre, fru, tni, xtr, mdo, mml

ssc-miR-124a

UUAAGGCACGCGGUGAAUGCCA

1

gga, ggo, age, ppa, ppy, ptr, mml, lla, bta, sme, mdo, odi, mmu

ssc-miR-125b

UCCCUGAGACCCUAACUUGUGA

2

mmu, hsa, rno, gga, dre, ggo, age, ppa, ppy, ptr, mml, sla, lla, mne, lca, tni, bta, xtr, sme, mdo, bta, cfa

ssc-miR-128

UCACAGUGAACCGGUCUCUUUU

4

mmu, hsa, rno, gga, dre, mml, ptr, ppy, sla, age, ppa, fru, tni, bta, xtr, mdo, mml, cfa

ssc-miR-145

GUCCAGUUUUCCCAGGAAUCCCUU

1

hsa, mmu, rno, dre, mml, ptr, ggo, ppy, mne, bta, xtr, mdo, dre

ssc-miR-148a

UCAGUGCACUACAGAACUUUGU

1

hsa, mmu, gga, bta, xtr, mml, cfa

ssc-miR-15b

CCGCAGCACAUCAUGGUUUACA

4

hsa, mmu, rno, gga, dre, ggo, age, ppa, ppy, ptr, mml, lla, mne, fru, tni, xtr, bta, cfa

ssc-miR-181b

AACAUUCAUUGCUGUCGGUGGGUU

1

hsa, mmu, rno, gga, dre, mml, ptr, ppy, ggo, lla, mne, ppa, fru, tni, xtr, bta, mdo, mml, cfa

ssc-miR-181c

AACAUUCAACCUGUCGGUGAGU

1

hsa, mmu, rno, dre, mml, ptr, ggo, ppa, bta, cfa, mdo

ssc-miR-20

UAAAGUGCUUAUAGUGCAGGUA

9

mmu, rno, gga, gga, hsa, dre, bta, xtr, mml, xla, ggo, lca, age, ppa, ppy, ptr, sla, lla, mne, fru, tni, mdo, cfa

ssc-miR-21

UAGCUUAUCAGACUGAUGUUGA

4

hsa, mmu, rno, dre, mml, ptr, ggo, ppy, mne, age, ppa, fru, tni, bta, gga, mdo, cgr, cfa

ssc-miR-23a

AUCACAUUGCCAGGGAUUUCC

1

hsa, mmu, rno, dre, ggo, age, ppa, lca, ppy, ptr, mml, sla, mne, fru, tni, xtr, bta, mdo, cfa

ssc-miR-24

UGGCUCAGUUCAGCAGGAACAG

3

xtr, hsa, mmu, rno, gga, dre, ppy, mne, ppa, ggo, ptr, mml, fru, tni, bta, mdo, cfa

ssc-miR-26a

UUCAAGUAAUCCAGGAUAGGCU

93

mmu, has, mmu, rno, gga, dre, ptr, ggo, ppy, lla, mne, mml, ppa, bta, mml, cfa, dre

ssc-miR-27a

UUCACAGUGGCUAAGUUCCGC

4

hsa, mmu, rno, dre, ggo, age, ppa, lca, ppy, ptr, mml, sla, mne, bta, xtr, mdo, cfa

ssc-miR-29b

UAGCACCAUUUGAAAUCAGU

6

hsa, mmu, rno, gga, dre, ppy, ptr, ggo, lla, age, ppa, ptr, ggo, ppy, sla, mne, ppa, fru, tni, xtr, bta, mdo, ame, mml, cfa

ssc-miR-29c

UAGCACCAUUUGAAAUCGGUUA

6

mmu, hsa, rno, gga, xtr, bta, mml, cfa

ssc-miR-30c

UGUAAACAUCCUACACUCUCAGC

3

hsa, mmu, bta, mmu, rno, gga, dre, ptr, lla, mne, fru, tni, xtr, mml, cfa