Table 2 MIPS FunCat analysis of O. affinis ESTs compared with Arabidopsis
MIPS Functional category | No. ESTs | % |
|---|---|---|
Metabolism | Â | Â |
   01 metabolism | 196 | 22.3% |
   02 energy | 53 | 6.0% |
Information pathways | Â | Â |
   10 cell cycle and DNA processing | 7 | 0.8% |
   11 transcription | 9 | 1.0% |
   12 protein synthesis | 60 | 6.8% |
   14 protein fate (folding, modification, destination) | 88 | 10.0% |
   16 protein with binding function or cofactor requirement (structural or catalytic) | 7 | 0.8% |
Transport | Â | Â |
   20 cellular transport, transport facilities and transport routes | 99 | 11.3% |
Perception and response to stimuli | Â | Â |
   30 cellular communication/signal transduction mechanism | 11 | 1.3% |
   32 cell rescue, defense and virulence | 74 | 8.4% |
   34 interaction with the environment | 25 | 2.8% |
   36 systemic interaction with the environment | 1 | 0.1% |
Developmental processes | Â | Â |
   40 cell fate | 13 | 1.5% |
   41 development (systemic) | 16 | 1.8% |
   42 biogenesis of cellular components | 9 | 1.0% |
   43 cell type differentiation | 6 | 0.7% |
   45 tissue differentiation | 1 | 0.1% |
   47 organ differentiation | 1 | 0.1% |
Localisation | Â | Â |
   70 subcellular localisation | 3 | 0.3% |
Proteins with unknown functions | 94 | 10.7% |
No match* | 107 | 12.2% |