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Table 2 MIPS FunCat analysis of O. affinis ESTs compared with Arabidopsis

From: Identification of candidates for cyclotide biosynthesis and cyclisation by expressed sequence tag analysis of Oldenlandia affinis

MIPS Functional category No. ESTs %
Metabolism   
   01 metabolism 196 22.3%
   02 energy 53 6.0%
Information pathways   
   10 cell cycle and DNA processing 7 0.8%
   11 transcription 9 1.0%
   12 protein synthesis 60 6.8%
   14 protein fate (folding, modification, destination) 88 10.0%
   16 protein with binding function or cofactor requirement (structural or catalytic) 7 0.8%
Transport   
   20 cellular transport, transport facilities and transport routes 99 11.3%
Perception and response to stimuli   
   30 cellular communication/signal transduction mechanism 11 1.3%
   32 cell rescue, defense and virulence 74 8.4%
   34 interaction with the environment 25 2.8%
   36 systemic interaction with the environment 1 0.1%
Developmental processes   
   40 cell fate 13 1.5%
   41 development (systemic) 16 1.8%
   42 biogenesis of cellular components 9 1.0%
   43 cell type differentiation 6 0.7%
   45 tissue differentiation 1 0.1%
   47 organ differentiation 1 0.1%
Localisation   
   70 subcellular localisation 3 0.3%
Proteins with unknown functions 94 10.7%
No match* 107 12.2%
  1. *The cyclotide precursors are within this subcategory.