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Table 4 Variability of recombination fraction (θ) for the MCST96O22-MCSI0244D12 interval among JXAU F1 females grouped by their paternal and maternal haplotypes1.

From: Recombinational landscape of porcine X chromosome and individual variation in female meiotic recombination associated with haplotypes of Chinese pigs

JXAU paternal half-sib families (F0 ♂ haplotype = F1 paternal haplotype)2 N θ F1 maternal haplotypes within 0F11 family2 N θ F1 maternal haplotypes within 0F21 family2 N θ
0F11 {6 [5414] 12} 518 0.071 0F11_7 [5325] 17 95 0.042 0F21_1 [1116] 17 35 0.000
0F21 {2 [2514] 12} 775 0.084 0F11_1 [5122] 35 12 0.083 0F21_1 [1321] 17 60 0.167
    0F11_1 [5321] 13 64 0.047 0F21_7 [5325] 17 72 0.056
    0F11_5 [1321] 14 79 0.076 0F21_7 [5621] 14 24 0.042
    0F11_5 [1321] 17 137 0.095 0F21_1 [5121] 13 23 0.000
    0F11_5 [1325] 17 18 0.056 0F21_1 [5122] 35 156 0.051
    0F11_5 [5321] 14 56 0.107 0F21_1 [5225] 11 12 0.083
    0F11_5 [5325] 17 20 0.150 0F21_1 [5321] 13 133 0.120
    0F11_9 [5121] 16 37 0.000 0F21_1 [5341] 38 22 0.227
       0F21_5 [1125] 49 28 0.036
       0F21_5 [1321] 14 153 0.065
       0F21_5 [5121] 14 50 0.140
       0F21_9 [5121] 16 7 0.286
Kosambi distance (cM)   7.96    7.19    8.47
Morton test   0.67    11.12    30.59
df   1    8    12
P value   0.414    0.195    0.002
Pr value3      0.090    0.006
  1. 1The haplotypes are formed by microsatellite markers (MCST96O22, UMNP891, MCSE347J6, SW1522, UMNP93, UMNP870, MCSI0244D12) within the interval of interest.
  2. 2Maternal haplotypes in bold are common to F1 females from both 0F11 and 0F21 families. The number between brackets represents the haplotype over the core UMNP891-UMNP93 interval.
  3. 3The pr values are determined after removing the haplotypes with <30 meioses.