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Table 2 Differentially expressed miRNAs in epithelial and stromal cells of colorectal tissues

From: Improvement of tissue preparation for laser capture microdissection: application for cell type-specific miRNA expression profiling in colorectal tumors

Name

Geomean

 

Fold change

Unpaired t-test

Cell type

 

Epithelial

Stromal

Epithelial/stromal

p-value

 

hsa-miR-143

64

512

0.1

1.30E-06

Stromal

hsa-miR-145

512

4096

0.1

5.60E-06

Stromal

hsa-miR-133a

2

16

0.1

2.40E-07

Stromal

hsa-miR-139-5p

2

8

0.3

2.20E-05

Stromal

hsa-miR-125b

256

1024

0.3

2.60E-07

Stromal

hsa-miR-149

8

32

0.3

8.30E-09

Stromal

hsa-let-7f-1*

1

8

0.1

6.80E-06

Stromal

hsa-miR-143*

1

8

0.1

1.80E-06

Stromal

hsa-miR-30a

32

128

0.3

5.30E-07

Stromal

hsa-miR-214

64

256

0.3

2.80E-06

Stromal

hsa-miR-199a-5p

128

512

0.3

6.20E-07

Stromal

hsa-miR-195

128

512

0.3

3.10E-06

Stromal

hsa-miR-365

128

512

0.3

3.60E-07

Stromal

hsa-miR-136

2

8

0.3

1.10E-05

Stromal

hsa-miR-129-3p

2

8

0.3

6.60E-05

Stromal

hsa-miR-30a*

1

4

0.3

4.00E-05

Stromal

hsa-miR-497

64

256

0.3

2.30E-05

Stromal

hsa-miR-140-5p

32

128

0.3

3.70E-07

Stromal

hsa-miR-877*

8

16

0.5

2.10E-05

Stromal

hsa-miR-199b-3p

512

1024

0.5

7.70E-07

Stromal

hsa-miR-22

512

1024

0.5

9.40E-06

Stromal

hsa-miR-490-3p

1

2

0.5

8.90E-05

Stromal

hsa-miR-23b

1024

2048

0.5

4.10E-06

Stromal

hsa-miR-140-3p

64

128

0.5

4.50E-05

Stromal

hsa-miR-141*

2

1

2

6.90E-05

Epithelial

hsa-miR-7-1*

4

2

2

6.20E-05

Epithelial

hsa-miR-194*

4

1

4

2.90E-06

Epithelial

hsa-miR-760

8

2

4

7.20E-05

Epithelial

hsa-miR-513c

4

1

4

3.80E-05

Epithelial

hsa-miR-200a*

8

2

4

1.70E-06

Epithelial

hsa-miR-148a

512

128

4

1.30E-06

Epithelial

hsa-miR-501-5p

8

2

4

4.10E-07

Epithelial

hsa-miR-601

16

2

8

5.60E-05

Epithelial

hsa-miR-7

64

8

8

5.00E-06

Epithelial

hsa-miR-500

16

2

8

5.10E-07

Epithelial

hsa-miR-210

128

16

8

1.30E-05

Epithelial

hsa-miR-892b

16

2

8

4.10E-09

Epithelial

hsa-miR-200b*

32

2

16

1.50E-08

Epithelial

hsa-miR-196a

64

2

32

5.90E-07

Epithelial

hsa-miR-192

2048

128

16

1.60E-07

Epithelial

hsa-miR-192*

64

2

32

1.40E-10

Epithelial

hsa-miR-96

64

2

32

9.60E-06

Epithelial

hsa-miR-203

128

2

64

2.70E-08

Epithelial

hsa-miR-215

1024

32

32

1.20E-06

Epithelial

hsa-miR-375

128

4

32

1.00E-05

Epithelial

hsa-miR-194

2048

16

128

1.20E-06

Epithelial

hsa-miR-429

512

4

128

3.80E-08

Epithelial

hsa-miR-200b

2048

32

64

1.60E-05

Epithelial

hsa-miR-141

1024

8

128

6.60E-07

Epithelial

hsa-miR-200a

1024

8

128

7.90E-07

Epithelial

hsa-miR-200c

1024

8

128

1.10E-05

Epithelial