| |
Nipponbare
|
PA64S
|
93-11
|
CW-CMS
|
LD-CMS
|
|---|
|
Accession no.
|
DQ167400
|
DQ167807
|
DQ167399
|
AP011076
|
AP011077
|
|---|
|
Origin of cytoplasm
|
japonica
|
japonica
|
indica
|
wild-rice
|
indica
|
|
Length
|
490,669
|
490,673
|
491,515
|
559,045
|
434,735
|
|
Synonymous mutations*
|
--
|
0
|
3***
|
1
|
0
|
|
Non-synonymous mutations*
|
--
|
0
|
2***
|
5
|
1
|
|
Large duplications (>10,000 bp)**
|
3
|
3
|
3
|
5
|
1
|
|
Recombination (vs Nipponbare)
|
--
|
0
|
0
|
15
|
12
|
|
Large InDels (>1,000 bp)
|
--
|
0
|
0
|
1
|
2
|
- *In comparison with Nipponbare within genic regions.
- ** In comparison with Nipponbare (w/o dup.)
- *** Referred in [9]
