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Table 1 Summary of genomic organization.

From: Discovery of global genomic re-organization based on comparison of two newly sequenced rice mitochondrial genomes with cytoplasmic male sterility-related genes

  Nipponbare PA64S 93-11 CW-CMS LD-CMS
Accession no. DQ167400 DQ167807 DQ167399 AP011076 AP011077
Origin of cytoplasm japonica japonica indica wild-rice indica
Length 490,669 490,673 491,515 559,045 434,735
Synonymous mutations* -- 0 3*** 1 0
Non-synonymous mutations* -- 0 2*** 5 1
Large duplications (>10,000 bp)** 3 3 3 5 1
Recombination (vs Nipponbare) -- 0 0 15 12
Large InDels (>1,000 bp) -- 0 0 1 2
  1. *In comparison with Nipponbare within genic regions.
  2. ** In comparison with Nipponbare (w/o dup.)
  3. *** Referred in [9]