Table 1 Summary of genomic organization.
| Â | Nipponbare | PA64S | 93-11 | CW-CMS | LD-CMS |
|---|---|---|---|---|---|
Accession no. | DQ167400 | DQ167807 | DQ167399 | AP011076 | AP011077 |
Origin of cytoplasm | japonica | japonica | indica | wild-rice | indica |
Length | 490,669 | 490,673 | 491,515 | 559,045 | 434,735 |
Synonymous mutations* | -- | 0 | 3*** | 1 | 0 |
Non-synonymous mutations* | -- | 0 | 2*** | 5 | 1 |
Large duplications (>10,000 bp)** | 3 | 3 | 3 | 5 | 1 |
Recombination (vs Nipponbare) | -- | 0 | 0 | 15 | 12 |
Large InDels (>1,000 bp) | -- | 0 | 0 | 1 | 2 |