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Table 2 Length of cDNA inserts, CDSs, and UTRs, and comparison with full-length cDNAs from other plants

From: Large-scale analysis of full-length cDNAs from the tomato (Solanum lycopersicum) cultivar Micro-Tom, a reference system for the Solanaceae genomics

  

cDNA insert

CDS

5'-UTR

3'-UTR

Reference

Tomato

average

1418

938

175

257

(Present study)

 

median

1324

876

106

220

 

Arabidopsis

average

1445

n.a.

n.a.

n.a.

[24]

 

median

1459

1097

88

184

 

Soybean

average

1539

1042

123

248

[23]

 

median

n.a.

933

75

233

 

Poplar

average

1045

649

109

228

[25]

 

median

990

558

77

209

 

Rice

average

n.a.

993

260

398

[24]

 

median

1548

947

123

279

 

Maize

average

n.a.

799

99

206

[26]

 

median

n.a.

741

80

228

[27]

  1. n.a.: Not available.
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BMC Genomics

ISSN: 1471-2164

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