Skip to main content

Table 2 Length of cDNA inserts, CDSs, and UTRs, and comparison with full-length cDNAs from other plants

From: Large-scale analysis of full-length cDNAs from the tomato (Solanum lycopersicum) cultivar Micro-Tom, a reference system for the Solanaceae genomics

   cDNA insert CDS 5'-UTR 3'-UTR Reference
Tomato average 1418 938 175 257 (Present study)
  median 1324 876 106 220  
Arabidopsis average 1445 n.a. n.a. n.a. [24]
  median 1459 1097 88 184  
Soybean average 1539 1042 123 248 [23]
  median n.a. 933 75 233  
Poplar average 1045 649 109 228 [25]
  median 990 558 77 209  
Rice average n.a. 993 260 398 [24]
  median 1548 947 123 279  
Maize average n.a. 799 99 206 [26]
  median n.a. 741 80 228 [27]
  1. n.a.: Not available.
Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us