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Table 1 List of fungal species, genomes of which were analyzed in silico in present study

From: Evolutionary genomics revealed interkingdom distribution of Tcn1-like chromodomain-containing Gypsy LTR retrotransposons among fungi and plants

Phylum/Subphylum

Class

Species and strain

genome size

(Mb)

LTRa

Ascomycota/Pezizomycotina

Sordariomycetes

Chaetomium globosum CBS 148.51

36

23

  

Fusarium oxysporum 4286 FGSC

60

39

  

Fusarium verticillioides 7600

46

4

  

Nectria haematococca MPVI

40

65

  

Podospora anserina S mat+

37

11

  

Trichoderma reesei QM6a

33

5

  

Trichoderma virens Gv29-8

38

5

 

Eurotiomycetes

Aspergillus clavatus NRRL 1

35

29

  

Aspergillus niger ATCC1015

37

1

  

Aspergillus terreus NIH2624

35

3

  

Coccidioides immitis RS

29

236

  

Histoplasma capsulatum NAm1

28

74

  

Uncinocarpus reesii 1704

30

64

 

Leotiomycetes

Sclerotinia sclerotiorum 1980

38

25

  

Botrytis cinerea B05.10

38

25

 

Dothideomycetes

Alternaria brassicicola ATCC 96866

30

108

  

Pyrenophora tritici-repentis Pt-1C-BFP

37.8

118

  

Stagonospora nodorum SN15

37

12

Basidiomycota/Agaricomycotina

Agaricomycetes (Homobasidiomycetes)

Amanita bisporigera

58

7

  

Coprinus cinereus Okayama7#130

38

160

  

Laccaria bicolor S238N

61

114

  

Postia placenta MAD-698

90

921

Basidiomycota/Pucciniomycotina

Urediniomycetes

Sporobolomyces roseus

21

6

  

Puccinia graminis f. sp. tritici

81.5

534

Chytridiomycota

Chytridiomycetes

Batrachochytrium dendrobatidis JEL423

24

1

  1. a total copy number of detected Gypsy LTR retrotransposons