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Table 4 Representative GO annotations for genes highly diverged in all test species.

From: Using comparative genomic hybridization to survey genomic sequence divergence across species: a proof-of-concept from Drosophila

FBgn GO_ID GO_name Gene_name %ID Dsec/Dmel %ID Dsim/Dmel %ID Dyak/Dmel
FBgn0013300 GO:0003677 DNA binding Male-specific-transcript-35Ba 81.53 82.76 NoHit
FBgn0033015 GO:0003700 transcription factor activity d4 NoHit NoHit NoHit
FBgn0036496 GO:0003729 mRNA binding CG7804 89.8 90.52 NoHit
FBgn0039659 GO:0003729 mRNA binding CG14506 86.81 88.06 81.48
FBgn0000303 GO:0004102 choline O-acetyltransferase activity Choline acetyltransferase 94.38 96.3 NoHit
FBgn0051742 GO:0004175 endopeptidase activity CG31742 93.04 92.45 89.66
FBgn0000258* GO:0004674 protein serine/threonine kinase activity Casein kinase II alpha subunit 90.53 89.88 87.34
FBgn0020386 GO:0004674 protein serine/threonine kinase activity Protein kinase 61C 90.62 89.63 NoHit
FBgn0028986 GO:0004867 serine-type endopeptidase inhibitor activity Serine protease inhibitor 3 93.21 91.91 84.96
FBgn0050289 GO:0004867 serine-type endopeptidase inhibitor activity CG30289 NoHit 84.64 81.74
FBgn0053225 GO:0004867 serine-type endopeptidase inhibitor activity CG33225 NoHit 84.18 NoHit
FBgn0040849 GO:0004970 ionotropic glutamate receptor activity Ionotropic receptor 41a NoHit NoHit NoHit
FBgn0050440* GO:0005085 guanyl-nucleotide exchange factor activity CG30440 NoHit NoHit NoHit
FBgn0031585 GO:0005200 structural constituent of cytoskeleton CG2955 92.31 93.85 NoHit
FBgn0028859 GO:0005245 voltage-gated calcium channel activity CG12455 90.96 90.4 NoHit
FBgn0037885 GO:0005515 protein binding CG17721 88.99 89.57 NoHit
FBgn0050054 GO:0005525 GTP binding CG30054 89.71 89.71 NoHit
FBgn0040099 GO:0005534 galactose binding lectin-28C 87.32 87.32 82.99
FBgn0026175 GO:0006511 ubiquitin-dependent protein catabolic process skpC 87.57 85.24 85.27
FBgn0058006* GO:0007155 cell adhesion CG40006 85.07 79.59 86.17
FBgn0052547 GO:0007186 G-protein coupled receptor protein signaling CG32547 94.83 94.83 NoHit
FBgn0003373* GO:0007594 puparial adhesion Salivary gland secretion 3 84.15 NoHit NoHit
FBgn0030420 GO:0008234 cysteine-type peptidase activity CG12717 NoHit NoHit 81.82
FBgn0031208 GO:0008234 cysteine-type peptidase activity CG11023 83.67 83.95 83.33
FBgn0029661 GO:0008270 zinc ion binding CG16781 NoHit 86.86 NoHit
FBgn0039498 GO:0008270 zinc ion binding CG17991 85.2 84.31 82.4
FBgn0038005 GO:0009055 electron carrier activity Cyp313a5 NoHit NoHit 89.6
FBgn0013576 GO:0016998 cell wall catabolic process l(3)82Fd 92.65 94.12 NoHit
FBgn0002855 GO:0018991 oviposition Accessory gland-specific peptide 26Aa 84.21 83.45 NoHit
  1. GO category shown for each gene was selected based on informational content and preponderance of evidence for that GO annotation. Genes not annotated beyond the terms molecular function, biological process, or cellular component, are not included. NoHit: no BLAST hit of array feature sequence to heterologous genome sequence (e-value < 10-14). *represented by multiple array features