Name | Website | Function |
---|---|---|
Genome Browsing Ensembl | Genome browser and annotation (chordates) | |
Ensembl Genomes | Genome browser and annotation (nonchordates) | |
Gbrowse | Genome browser and annotation (fruit fly) | |
NCBI Map Viewer | Genome browser and annotation (multi-species) | |
NCBI Sequence Viewer | Genome browser and annotation (multi-species) | |
UCSC Browser | Genome browser and annotation (multi-species) | |
VISTA Enhancer Browser | Non-coding elements (human) | |
1000 Genomes Browser | Genome browser (human, multiple individuals) | |
IGB | Visualization tool (multiple sources) | |
IGV | Visualization tool (multiple sources) | |
DAS DAS Registry | DAS sources available | |
Ensembl DAS list | DAS sources available in Ensembl | |
Protein and Nucleotides RefSeq | Repository of nucleic acid and protein sequences | |
UniProt | Repository of protein sequence (manually curated) | |
Tools BioMart | Data mining tool for export of tables and sequences | |
EMBOSS | Open source software for molecular biology | |
TreeBest | Construction and analysis of phylogenetic trees | |
Regulatory Features CisRed | Database: Regulatory sequences | |
DNase I Footprint | Database: Transcription factor binding sites (fly) | |
miRanda | Database: miRNA targets (multi-species) |