Table 1 EhSINE1s detected in this study - basic summary data.
From: Bioinformatic analysis of Entamoeba histolytica SINE1 elements
Repeats | No. of EhSINE1s. (%) | Length, range (bp) | Length , mean ± SD (bp) | With TSDs# - No. (%) | ||
|---|---|---|---|---|---|---|
| Â | Â | Â | Â | All significant | No mis-match allowed | 0 or 1 mis- match allowed |
1 | 158 (40) | 451-536 | 510 ± 22.9* | 131 (83) | 53 (34) | 80 (51) |
2 | 67 (17) | 543-555 | 548 ± 1.8 | 65 (97) | 19 (29) | 48 (71) |
3 | 7 (2) | 516-575 | ND§ | 6 (86) | 1 (14) | 4 (57) |
R1 only | 6 (1) | 467-539 | ND§ | 5 (80) | 1 (17) | 3 (50) |
R3 only | 89 (23) | 460-612 | 573 ± 27 | 78 (88) | 13 (15) | 48 (54) |
4 | 3 (1) | 600-602 | ND§ | 3 (100) | 0 (0) | 3 (100) |
None | 63 (16) | 451-684 | 561+58.7 | 42 (67) | 19 (30) | 33 (52) |
TOTAL | 393 (100) | 451-684 | 541 ± 41.5 | 324 (82) | 106 (27) | 219 (56) |