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Table 1 Conditional probability distribution of disease genotypes for a given marker genotype

From: Inferring linkage disequilibrium from non-random samples

MM

Mm

mm

AA

Aa

aa

AA

Aa

aa

AA

Aa

aa

Q 2

2Q(1 - Q)

(1 - Q)2

QR

Q + R - 2QR

(1 - Q)(1 - R)

R 2

2R(1 - R)

(1 - R)2

n 11

n 12

n 13

n 21

n 22

n 23

n 31

n 32

n 33

  1. Q = q + D/p and R = q - D/(1 - p)