Table 4 Comparative analysis of the method and robustness
From: Genome-wide identification of new Wnt/β-catenin target genes in the human genome using CART method
Method | Instance 1 | Instance 2 | Instance 3 | Instance 4 | Prior | New |
|---|---|---|---|---|---|---|
Instance 1 | 155 (100%) | 150 (97%) | 147 (95%) | 151 (97%) | 66 (100%) | 89 |
Instance 2 | 150 (97%) | 155 (100%) | 147 (95%) | 150 (97%) | 66 (100%) | 89 |
Instance 3 | 147 (95%) | 147 (95%) | 155 (100%) | 149 (96%) | 66 (100%) | 89 |
Instance 4 | 151 (97%) | 150 (97%) | 149 (96%) | 155 (100%) | 66 (100%) | 89 |
KNN 1 | 1 (1%) | 1 (1%) | 1 (1%) | 1 (1%) | 0 (0%) | 30 |
KNN 2 | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 17 |
SVM | 66 (43%) | 66 (43%) | 66 (43%) | 66 (43%) | 66 (100%) | 0 |
CART | 58 (37%) | 58 (37%) | 58 (37%) | 58 (37%) | 44 (67%) | 46 |
L-1-O (avg) | 147,8 (95%) | 145,6 (94%) | 144 (93%) | 145,7 (94%) | 66 (100%) | 89 |