From: An initial map of chromosomal segmental copy number variations in the chicken
Locus ID | Chromosome | Start position* | Size (bp) | Gene | Status # | Number of observations | ||
---|---|---|---|---|---|---|---|---|
 |  |  |  |  | Broiler | Leghorn | RIR†|  |
1 | 1 | 4015022 | 47654 | LOC419112 | loss | loss | loss | 6 |
2 | 1 | 44980061 | 80399 | Non-coding | loss | loss | Â | 7 |
3 | 1 | 48005486 | 34931 | Non-coding | gain | Â | Â | 3 |
4 | 1 | 59885173 | 32693 | CHRM2 | Â | loss | Â | 2 |
5 | 1 | 165880299 | 112347 | ZFR, IL-3 | gain | gain | Â | 4 |
6 | 2 | 40647961 | 39933 | Spliced ESTs | Â | gain | loss | 2 |
7 | 2 | 95665092 | 10297 | Non-coding | gain | gain | Â | 4 |
8 | 2 | 97295434 | 44839 | Non-coding | gain | gain | Â | 5 |
9 | 2 | 134727846 | 102330 | MGC24975(SZD6) | gain | gain | Â | 3 |
10 | 2 | 154562776 | 299829 | SCRIB | loss | gain | Â | 2 |
11 | 3 | 113612615 | 40053 | MRPL19, | loss | Â | loss | 2 |
12 | 4 | 62172811 | 12364 | Non-coding | loss | Â | loss | 2 |
13 | 4 | 88897639 | 175343 | RHACD8 | gain | loss | loss | 5 |
14 | 4 | 89602897 | 42219 | Non-coding | Â | loss | Â | 3 |
15 | 5 | 22120222 | 92556 | Non-coding | Â | loss | Â | 3 |
16 | 6 | 12150334 | 84982 | Non-coding | Â | loss | loss | 3 |
17 | 10 | 125113 | 32851 | olfactory receptor 6k2 | gain | gain | Â | 2 |
18 | 11 | 2670295 | 14897 | Non-coding | gain | Â | Â | 3 |
19 | 12 | 15208 | 77317 | Non-coding | loss | Â | Â | 2 |
20 | 13 | 2722503 | 60308 | EST | loss | Â | loss | 3 |
21 | 16 | 200114 | 12820 | Zinc finger protein | loss | loss | Â | 2 |
22 | 16 | 270019 | 162832 | HLA class I antigen | loss | loss | Â | 2 |
23 | 17 | 567532 | 57890 | PRF1 | gain | Â | Â | 2 |
24 | Z | 9965426 | 192201 | PRLR | loss | loss | Â | 2 |
25 | Z | 71975037 | 142814 | CDKN2A, MTAP | loss | loss | loss | 3 |
26 | Z | 73495364 | 29964 | Non-coding | gain | gain | Â | 2 |