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Table 4 Genes significantly down-regulated post-training compared to pre-training levels

From: Characterization of the equine skeletal muscle transcriptome identifies novel functional responses to exercise training

Tag

Gene Symbol

Gene Name

FC

Adj P

acccgagagacagccga

ACTN3

actinin, alpha 3

-0.97

0.029

acacagttagttaattt

AHCYL2*

Putative adenosylhomocysteinase 3

-1.39

0.006

acacagttagttaattt

AHCYL2*

Putative adenosylhomocysteinase 3

-1.39

0.006

taattttatttttttta

ANKHD1*

Ankyrin repeat and KH domain containing 1

-2.30

0.043

ttttccctcacatcttc

APOOL*

Apolipoprotein O-like

-0.54

0.003

cttagtgtgtatatctc

ATP2B1

ATPase, Ca++ transporting, plasma membrane 1

-0.62

0.041

atcattattttaccttt

BCL6*

B-cell CLL/lymphoma 6

-3.09

0.011

acggttttccccagatc

C1orf51*

Chromosome 1 open reading frame 51

-1.61

0.035

cactggccaaaagattt

C21orf7

Chromosome 21 open reading frame 7

-3.08

0.035

ccactaccctcttactc

CALM3*

Calmodulin3

-1.46

0.009

acagacacttggctaaa

CALM3*

Calmodulin3

-0.83

0.043

aacagaatcaaggagct

CCNDBP1

Cyclin-D1-binding protein 1

-0.81

0.035

gaaaacagtagctaaag

DAG1

dystroglycan 1

-1.49

0.022

ctcaacagcaacatcaa

EIF3F

Eukaryotic translation initiation factor 3, subunit F

-0.52

0.002

tccagcctcaaagcatt

FBXL17*

F-Box And Leucine-Rich Repeat Protein 17

-0.52

0.002

aactgtagtgctttaaa

GATM

Glycine Amidinotransferase

-1.35

0.035

taggttttacctccatt

GATM*

Glycine Amidinotransferase

-1.35

0.001

ctggaacaggggcgaac

GLUL*

Glutamate-ammonia ligase

-3.94

0.007

cccatcatccccttcct

GPSN2

GLYCOPROTEIN, SYNAPTIC 2

-1.06

0.004

aagtcccaccccaatat

GSTM5*

Glutathione S-transferase M5

-1.1

0.004

tccacccataagcagat

HOXC9*

Homeobox protein Hox-C9

-1.04

0.038

ggactgtctttattttt

IGFBP5*

Insulin-like growth factor binding protein-5

-2.32

0.001

gtaaccctacacagtca

IGFBP5*

Insulin-like growth factor binding protein-5

-2.12

0.038

cccagaaagacatttgt

IRF2BP2*

Interferon regulatory factor 2 binding protein 2

-1.57

0.001

caaaaggctctcctaat

KCMF1

potassium channel modulatory factor 1

-0.81

0.048

tttccattcaacaaaaa

KPNA1*

Karyopherin alpha 1

-1.8

0.006

aattactctttcactgt

KPNA3*

Karyopherin alpha 3

-1.55

0.043

cttttcacacacaaaac

LRRFIP1*

Leucine Rich Repeat

-0.95

4.1 × 10-5

ttaagtgccattactac

MAP3K4

Mitogen-activated protein kinase kinase kinase 4

-0.85

0.048

ccccaccctactcccac

MLEC*

Malectin

-1.13

0.017

tatgacagaaaagcaac

MSTN*

Myostatin

-2.56

0.002

atgactgtataatgtga

MSTN*

Myostatin

-2.55

0.008

gttcctaaataaataat

MSTN*

Myostatin

-4.2

0.004

ctgctgagcggcctctc

MYLK2

Myosin Light Chain Kinase 2, Skeletal Muscle

-1.94

0.034

gctcattaaagaacaaa

MYO9A*

Myosin Ixa

-1.03

0.043

ctatcttttccttttct

NAT12*

N-acetyltransferase MAK3 homolog

-0.68

0.002

attgtttaaatatcact

NEDD4*

Neural precursor cell expressed, developmentally down-regulated 4

-0.97

0.012

aaatcccaccctcccct

NLN*

Neurolysin

-1.02

0.008

tccagctttctattctt

PALLD*

Palladin, cytoskeletal associated protein

-1.06

0.039

cttctttccccacctcc

PCBP4

Poly(rC) binding protein 4

-0.82

0.004

taattgcagtttactat

GNPNAT1*

Similar to glucosamine-phosphate N-acetyltransferase 1

-1.23

0.006

ctctagaacatttacct

PTDSS1*

Phosphatidylserine synthase 1

-0.62

0.003

agagtcaatataaaggt

PTPLA*

Protein Tyrosine Phosphatase-Like

-2.07

0.01

aaatctaaagttaaata

RAB33B*

RAB33B, member RAS oncogene family

-1.24

0.04

cagccctgggggcctac

RYK

Ryk Receptor-Like Tyrosine Kinase

-0.94

0.005

attcccatttctagtaa

SEPT7*

Transcribed locus

-0.72

0.018

tgaggacaaagctcagg

SLC10A2*

Solute carrier family 10

-4.11

0.001

ccttcaactcaacaaat

SNAP29*

Synaptosomal-associated protein, 29 kDa

-0.43

0.009

gtattgtaagatattaa

SNORA24*

Small nucleolar RNA SNORA24

-0.89

0.037

aagcaagaaataaattt

TET1*

Tet oncogene 1

-1.4

0.029

atgcagagcaccacaga

TLE1

transducin-like enhancer of split 1

-1.58

2.0 × 10-5

actgacatatgtaaaga

TOR3A*

torsin family 3, member A

-1.49

0.022

tgcctatcacctgccgg

TPD52*

Tumor protein D52

-0.68

0.005

tcctttcagtcttcaca

TSPAN3

Tetraspanin 3

-0.58

0.04

ctttgtgacttccaagt

ULK2*

Unc-51-like kinase 2

-0.72

0.018

aaaccatatttcttccc

VCL*

Vinculin

-1.13

0.005

cccaggcccgtccctgc

ZC3H3*

Zinc finger CCCH-type containing 3

-1.28

0.035

aagtctaacttccattt

ZNF704*

Zinc finger protein 704

-0.93

0.013

ttagtttcttttcttta

ZWINT*

ZW10 interactor

-1.21

1.1 × 10-4

  1. An asterisk (*) indicates that the tag lay within 5 kb of the gene. FC - fold change; Adj P - adjusted P value using the Benjamini and Hochberg method.