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Table 6 Comparison of ME-Scan results with previously genotyped AluYb8/9 insertion loci

From: Mobile element scanning (ME-Scan) by targeted high-throughput sequencing

Individual Index ME-Scan Positives ME-Scan Negatives False Positives* False Negatives
Replication      
A ACCAT 20 11 1 0
A TATTC 20 11 1 0
Pooling      
A ACCAT 18 13 1 2
B TATTC 23 10 0 4
C GGTTA 23 10 1 5
D CGCTA 26 7 0 0
D TTGAT 26 7 0 0
Overall All 156 69 4 11
  1. * All four of the apparent ME-Scan false positives are due to errors (false negatives) in the previous PCR- and gel-based genotyping.