Skip to main content

Table 2 GO Biological processes significantly altered following starvation

From: Starvation alters the liver transcriptome of the innate immune response in Atlantic salmon (Salmo salar)

GO Identifier1

Term2

q3

m4

p5

Blood and oxygen transport

GO:0015669

gas transport

10

19

0.00

GO:0015671

oxygen transport

10

19

0.00

Amino acid metabolism

GO:0006544

glycine metabolic process

5

33

0.05

GO:0006541

glutamine metabolic process

3

16

0.08

Fatty acid and steroid metabolism

GO:0006720

isoprenoid metabolic process

5

33

0.05

GO:0016125

sterol metabolic process

4

18

0.03

GO:0008299

isoprenoid biosynthetic process

4

10

0.00

GO:0008203

cholesterol metabolic process

3

15

0.06

Immune function

GO:0006953

acute-phase response

3

17

0.09

GO:0009617

response to bacterium

3

13

0.05

GO:0042742

defense response to bacterium

3

13

0.05

GO:0006935

chemotaxis

7

27

0.00

Cellular homeostasis

GO:0006873

cellular ion homeostasis

7

60

0.06

GO:0030003

cellular cation homeostasis

7

50

0.03

GO:0048878

chemical homeostasis

7

69

0.09

GO:0050801

ion homeostasis

7

61

0.06

Cellular responses

GO:0042221

response to chemical stimulus

17

184

0.01

GO:0009605

response to external stimulus

10

56

0.00

GO:0040011

locomotion

8

53

0.01

GO:0007610

behaviour

7

37

0.00

Other processes

GO:0022603

regulation of anatomical structure morphogenesis

4

27

0.08

GO:0001501

skeletal system development

4

22

0.05

GO:0018904

organic ether metabolic process

3

8

0.01

GO:0030334

regulation of cell migration

3

17

0.09

  1. Gene ontology (GO) identifiers over represented in genes found differentially expressed following infection. In total 175 genes (69 up regulated and 106 down regulated) genes were included in the list for GO analysis. 1Gene ontology identifier, 2Gene Ontology term, 3number of times the GO term is present in the gene list, 4number of times the GO term is present on the filtered array list, 5statistical enrichment for GO term. Only GO terms that appear 4 or more times are shown. Full list is shown in Additional file Table S2.