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Table 4 Overlap between repeat and inter-LCB region

From: Markedly different genome arrangements between serotype a strains and serotypes b or c strains of Aggregatibacter actinomycetemcomitans

Strain Total
inter-LCB
length
(bp)
Total
repeat
length
(bp)
Total
overlap
(bp)
Percent of
repeat
overlapping
with inter-LCB
Percent of
inter-LCB
overlapping
with repeat
D7S-1a 251,896 159,531 105,889 66.4% 42%
HK1651b 90,658 50,603 16,729 33.1% 18.5%
D11S-1c 112,883 53,208 20,973 39.4% 18.6%
  1. a Regions between rearranged conserved blocks (inter-LCB) for D7S-1 are obtained from D7S-1 vs HK1651 MAUVE alignment.
  2. b Regions between rearranged conserved blocks (inter-LCB) for HK1651 are obtained from D7S-1 vs HK1651 MAUVE alignment
  3. c Regions between rearranged conserved blocks (inter-LCB) for D11S-1 are obtained from D7S-1 vs D11S-1 MAUVE alignment