Implementation of exon arrays: alternative splicing during T-cell proliferation as determined by whole genome analysis

Table 1 Enrichment analysis in GO of transcripts from alternate exon usage and differential expression analysis of lymphocyte proliferation.

Analysis	Compare to D0	No. significant transcript	Cell cycle process	Cell cycle	Cell division	Metabolic process	Chromosome segregation	Cellular organization and biogenesis	Cell proliferation	Cell death	Cell adhesion	Cell communication
No. genes in category			376	381	234	3599	25	924	278	417	620	527
	D1	204
	D3	359				108				20
AEU	D5	288	13		9	80		26
	D7	256	11			75		24
	Time	472				121		39
	D1	621		30		161			17	25
	D3	1855	116	119	80	499	12	137	57	66	35	34
DE	D5	880	76	84	61	207	11	68	33	30
	D7	818	66	68	52	196	10	64	32	32
	Time	1980	120	116	82	518	13	153	53	68		39

Gene Ontology (GO) enrichment analysis of transcript lists was undertaken in Partek Genomic Suite. Results are presented for Cellular Process category under the GO Biological Process. Groups are presented with an enrichment score > 3 and > 5 genes per group.
AEU: alternate exon usage
DE: Differential expression

ISSN: 1471-2164