|
# Probesets
|
Transcript ID
|
Gene Symbol
|
RefSeq
|
Alternative Splicing p-value
|
Fold Change Tumor vs Cell
|
|---|
|
13
|
3959350
|
APOL3
|
NM_030644
|
7.20E-11
|
-1.0483
|
|
14
|
3079463
|
ABCF2
|
NM_007189
|
2.53E-16
|
-1.0105
|
|
14
|
3082759
|
DLGAP2
|
NM_004745
|
0.0102642
|
-1.75766
|
|
20
|
3859761
|
DMKN
|
NM_033317
|
1.72E-25
|
-1.00705
|
|
33
|
3132016
|
FGFR1
|
NM_023111
|
0
|
1.86159
|
|
17
|
4026722
|
IDH3G
|
NM_174869
|
3.34E-21
|
1.37367
|
|
12
|
4027708
|
MTCP1
|
NM_001018025
|
0.000139499
|
-1.12104
|
|
22
|
2628785
|
MITF
|
NM_006722
|
1.62E-27
|
1.04061
|
|
23
|
3795184
|
NFATC1
|
NM_172389
|
1.05E-19
|
1.03091
|
|
54
|
3564071
|
NIN
|
NM_020921
|
7.07E-13
|
1.03063
|
|
35
|
2517588
|
OSBPL6
|
NM_032523
|
2.44E-10
|
-1.26328
|
|
40
|
2858134
|
PDE4D
|
NM_006203
|
0
|
-1.69311
|
|
29
|
3923632
|
PFKL
|
NM_001002021
|
0
|
1.258
|
|
12
|
3751184
|
PHF12
|
NM_001033561
|
8.89E-18
|
1.09533
|
|
19
|
3821200
|
PRKCSH
|
NM_001001329
|
0
|
-1.0575
|
|
9
|
3688311
|
PYCARD
|
NM_145182
|
2.36E-10
|
1.58277
|
|
38
|
2395245
|
RERE
|
NM_012102
|
0
|
-1.10969
|
|
38
|
2683763
|
ROBO1
|
NM_002941
|
0
|
2.52196
|
|
25
|
3930360
|
RUNX1
|
NM_001754
|
0
|
2.48266
|
|
14
|
4007588
|
SLC35A2
|
NM_001042498
|
3.63E-08
|
-1.01314
|
|
23
|
2428313
|
ST7L
|
NM_138729
|
1.59E-42
|
-1.26644
|
|
18
|
3049025
|
TBRG4
|
NM_199122
|
0.00E+00
|
2.29256
|
|
21
|
2402601
|
UBXD5
|
NM_183008
|
3.82E-14
|
1.00668
|
|
12
|
2706791
|
ZMAT3
|
NM_152240
|
1.02E-19
|
1.5543
|
- The genes were selected by limiting the p-values for alternative splicing to <.0001. To eliminate genes that had whole transcript level differences the p value for gene expression was set at p > 0.9 and a fold change of <2.5 or >-2.5. The individual probesets for the genes were then visually examined and those with corresponding reports of alternative splicing events in RefSeq were included in the analysis.
