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Table 2 Probe coverage of newly sequenced genomes

From: Probing the pan-genome of Listeria monocytogenes: new insights into intraspecific niche expansion and genomic diversification

Genome

Lineage

Probe coverage

  

100%

90%

80%

R2-561

II

0.95

0.98

0.98

Clip 80459

I

0.91

0.99

0.99

Finland 1988

I

0.80

0.96

0.98

HCC23

III

0.30

0.80

0.89

  1. Proportion of genes from four newly sequenced strains with probe coverage meeting a minimum percentage of the gene length (100%, 90%, 80%) for probes containing at most one SNP.
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BMC Genomics

ISSN: 1471-2164

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