Skip to main content

Table 2 ESTs information and clustering.

From: Generation and analysis of ESTs from strawberry (Fragaria xananassa) fruits and evaluation of their utility in genetic and molecular studies

Library Raw sequences Good-quality ESTs EST length bp/N average Singletons Contigs
(Average size)
Unigene
(Average size)
 
M1 1908 1863 534±98 155 1069    
M2 1265 1239 537 ± 107 139 760    
C1 358 350 549 ± 179 277 156    
C2 403 398 609 ± 186 170 226 1120 7096  
C3 358 355 484 ± 155 316 163    
L1 350 343 343 ± 68 291 109 (619.74 ± 195.83) (491.25 ± 195.83)  
CO3 3753 3644 359 ± 175 51 2465    
CO8 1511 1497 612 ± 150 548 974    
SGBL 112 101 385 ± 158 398 54    
Total 10018 9790    5976    
  1. Clustering and determination of the consensus sequences were performed through the TGICL pipeline as described in the Methods section.