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Table 1 GO function annotation results of 8216 unigenes

From: Transcriptome and expression profiling analysis revealed changes of multiple signaling pathways involved in immunity in the large yellow croaker during Aeromonas hydrophila infection

Term

GO ID

Description

Gene No.

%*

P Value

CC_2

GO:0044464

cell part

2650

98.84

0.000013

CC_2

GO:0005622

intracellular

2041

76.13

0.000000

CC_2

GO:0044424

intracellular part

1707

63.67

0.000000

CC_2

GO:0043229

intracellular organelle

1351

50.39

0.000000

CC_2

GO:0043227

membrane-bounded organelle

1103

41.14

0.000000

CC_2

GO:0044446

intracellular organelle part

466

17.38

0.000000

CC_2

GO:0044422

organelle part

466

17.38

0.000000

CC_2

GO:0043234

protein complex

410

15.29

0.000000

CC_2

GO:0043228

non-membrane-bounded organelle

366

13.65

0.000000

CC_2

GO:0030529

ribonucleoprotein complex

210

7.83

0.000000

CC_2

GO:0031090

organelle membrane

137

5.11

0.001153

CC_2

GO:0043233

organelle lumen

135

5.04

0.000000

CC_2

GO:0031967

organelle envelope

98

3.66

0.000398

CC_2

GO:0012505

endomembrane system

86

3.21

0.021749

MF_2

GO:0000166

nucleotide binding

827

22.39

0.000000

MF_2

GO:0016787

hydrolase activity

674

18.25

0.000000

MF_2

GO:0016740

transferase activity

606

16.4

0.000001

MF_2

GO:0001882

nucleoside binding

506

13.7

0.000000

MF_2

GO:0016874

ligase activity

122

3.3

0.000001

MF_2

GO:0003735

structural constituent of ribosome

118

3.19

0.000000

MF_2

GO:0048037

cofactor binding

96

2.6

0.001411

MF_2

GO:0060589

nucleoside-triphosphatase regulator activity

77

2.08

0.001763

MF_2

GO:0008135

translation factor activity, nucleic acid binding

60

1.62

0.000000

MF_2

GO:0016853

isomerase activity

58

1.57

0.000002

MF_2

GO:0003702

RNA polymerase II transcription factor activity

32

0.87

0.000002

MF_2

GO:0051540

metal cluster binding

24

0.65

0.026354

MF_2

GO:0008430

selenium binding

16

0.43

0.031351

MF_2

GO:0019825

oxygen binding

11

0.3

0.022460

MF_2

GO:0004601

peroxidase activity

9

0.24

0.072047

MF_2

GO:0008641

small protein activating enzyme activity

5

0.14

0.071494

BP_2

GO:0044238

primary metabolic process

1571

50.18

0.000000

BP_2

GO:0044237

cellular metabolic process

1466

46.82

0.000000

BP_2

GO:0043170

macromolecule metabolic process

1271

40.59

0.000000

BP_2

GO:0009058

biosynthetic process

637

20.34

0.000000

BP_2

GO:0006807

nitrogen compound metabolic process

608

19.42

0.000020

BP_2

GO:0051234

establishment of localization

533

17.02

0.051495

BP_2

GO:0006810

transport

528

16.86

0.055745

BP_2

GO:0009056

catabolic process

235

7.51

0.000000

BP_2

GO:0033036

macromolecule localization

214

6.83

0.000000

BP_2

GO:0045184

establishment of protein localization

178

5.69

0.000000

BP_2

GO:0006996

organelle organization

154

4.92

0.031676

BP_2

GO:0051641

cellular localization

139

4.44

0.000000

BP_2

GO:0051649

establishment of localization in cell

132

4.22

0.000000

BP_2

GO:0065008

regulation of biological quality

124

3.96

0.055589

BP_2

GO:0022607

cellular component assembly

107

3.42

0.001415

BP_2

GO:0042221

response to chemical stimulus

88

2.81

0.067111

BP_2

GO:0043933

macromolecular complex subunit organization

84

2.68

0.000005

BP_2

GO:0016192

vesicle-mediated transport

75

2.4

0.000639

BP_2

GO:0006066

alcohol metabolic process

64

2.04

0.022528

BP_2

GO:0019725

cellular homeostasis

63

2.01

0.000479

BP_2

GO:0070271

protein complex biogenesis

58

1.85

0.000005

BP_2

GO:0034621

cellular macromolecular complex subunit organization

58

1.85

0.003498

BP_2

GO:0002520

immune system development

54

1.72

0.000019

BP_2

GO:0051301

cell division

45

1.44

0.019598

BP_2

GO:0022613

ribonucleoprotein complex biogenesis

38

1.21

0.000011

BP_2

GO:0019637

organophosphate metabolic process

38

1.21

0.029496

BP_2

GO:0009893

positive regulation of metabolic process

37

1.18

0.060638

BP_2

GO:0006413

translational initiation

25

0.8

0.000041

BP_2

GO:0051236

establishment of RNA localization

15

0.48

0.017466

BP_2

GO:0042440

pigment metabolic process

14

0.45

0.004606

BP_2

GO:0044087

regulation of cellular component biogenesis

13

0.42

0.008675

  1. *, indicates the percentage of genes in the specific subcategory from each of the three GO ontologies.