Table 2 Clade 2-specific genes
Tag | Product | Gene | Cog |
|---|---|---|---|
VV1_0456 | putative transcriptional regulator | - | COG0583K |
VV1_0457 | hypothetical protein VV1_0457 | - | - |
VV1_0458 | hypothetical protein VV1_0458 | - | - |
VV1_0459 | hypothetical protein VV1_0459 | - | - |
VV1_0465 | exopolyphosphatase | - | COG0248FP |
VV1_0515 | hypothetical protein VV1_0515 | - | COG3930S |
VV1_0766 | hypothetical protein VV1_0766 | - | - |
VV1_0789 | hypothetical protein VV1_0789 | - | - |
VV1_1090 | hypothetical protein VV1_1090 | - | - |
VV1_1094 | chromosome segregation ATPase | - | - |
VV1_1095 | Serine/threonine protein kinase | - | COG0515RTKL |
VV1_1518 | 3-methyladenine DNA glycosylase | - | COG0122L |
VV1_1751 | hypothetical protein VV1_1751 | - | - |
VV1_2031 | Type I restriction enzyme EcoEI M protein | - | COG0286V |
VV1_2037 | Type I restriction enzyme EcoEI R protein | - | COG4096V |
VV1_2038 | transcriptional regulator | - | - |
VV1_2061 | GGDEF family protein OMPH_PHOPR porin-like protein H | - | COG2199T |
VV1_2114 | precursor | - | COG3203M |
VV1_2115 | hypothetical protein VV1_2115 | - | COG3110S |
VV1_2158 | methyl-accepting chemotaxis protein | - | COG0840NT |
VV1_2183 | hypothetical protein VV1_2183 | - | COG2378K |
VV1_2184 | ATPase involved in DNA repair | - | COG0419L |
VV1_2228 | GGDEF family protein | - | COG3706T |
VV1_2321 | GGDEF family protein | - | COG3614T |
VV1_2326 | hypothetical protein VV1_2326 | - | - |
VV1_2327 | hypothetical protein VV1_2327 | - | - |
VV1_2329 | hypothetical protein VV1_2329 | - | - |
VV1_2330 | Flp pilus assembly protein CpaB | - | COG3745U |
VV1_2331 | Flp pilus assembly protein | - | COG4964U |
VV1_2332 | hypothetical protein VV1_2332 | - | - |
VV1_2333 | pilus assembly protein CpaE-like protein | - | COG4963U |
VV1_2334 | Flp pilus assembly protein | - | COG4962U |
VV1_2335 | Flp pilus assembly protein TadB | - | COG4965U |
VV1_2336 | Flp pilus assembly protein TadC | - | COG4965U |
VV1_2337 | Flp pilus assembly protein TadD | - | COG5010U |
VV1_2338 | hypothetical protein VV1_2338 | - | - |
VV1_2339 | hypothetical protein VV1_2339 | - | COG4961U |
VV1_2340 | hypothetical protein VV1_2340 | - | - |
VV1_2341 | azoreductase | acpD | COG1182I |
VV1_2401 | super-integron integrase IntIA | - | COG4974L |
VV1_2708 | hypothetical protein VV1_2708 | - | - |
VV1_2748 | response regulator | - | COG3437KT |
VV1_2758 | amino acid transporter | - | - |
VV1_2840 | NhaP-type Na+/H+ and K+/H+ antiporters | - | COG0025P |
VV1_2868 | methyl-accepting chemotaxis protein | - | COG0840NT |
VV1_3144 | hypothetical protein VV1_3144 | - | - |
VV2_0019 | alcohol dehydrogenase | - | COG1454C |
VV2_0073 | anti-anti-sigma regulatory factor | - | COG1366T |
VV2_0074 | anti-anti-sigma regulatory factor | - | COG1366T |
VV2_0075 | anti-sigma regulatory factor | - | COG2172T |
VV2_0076 | Serine phosphatase RsbU | - | - |
VV2_0077 | FOG: CheY-like receiver | - | COG0642T |
VV2_0078 | response regulator AraC-type DNA-binding domain-containing | - | COG3437KT |
VV2_0212 | protein | - | COG2207K |
VV2_0312 | hypothetical protein VV2_0312 | - | - |
VV2_0313 | response regulator | - | COG0745TK |
VV2_0627 | hypothetical protein VV2_0627 AraC-type DNA-binding domain-containing | - | COG2378K |
VV2_0782 | protein | - | COG2207K |
VV2_0783 | major facilitator superfamily permease | - | - |
VV2_0851 | hypothetical protein VV2_0851 | - | COG0845M |
VV2_0864 | hypothetical protein VV2_0864 | - | - |
VV2_0868 | acetyltransferase | - | COG0456R |
VV2_0881 | long-chain fatty acid ABC transporter | - | COG2067I |
VV2_0884 | Mg2+ and Co2+ transporter | - | - |
VV2_0993 | transcriptional regulator | - | COG0583K |
VV2_0994 | multidrug resistance efflux pump | - | COG1566V |
VV2_1075 | dehydrogenase | - | COG1028IQR |
VV2_1138 | hypothetical protein VV2_1138 | - | COG3904S |
VV2_1149 | hypothetical protein VV2_1149 | - | - |
VV2_1186 | transcriptional regulator | - | COG0583K |
VV2_1203 | hypothetical protein VV2_1203 | - | COG3930S |
VV2_1204 | glutathione synthetase | - | COG0189HJ |
VV2_1273 | transcriptional regulator | - | COG0583K |
VV2_1274 | Ca2+/H+ antiporter | - | COG0387P |
VV2_1275 | hypothetical protein VV2_1275 | - | COG0586S |
VV2_1290 | hypothetical protein VV2_1290 | - | COG0834ET |
VV2_1303 | hypothetical protein VV2_1303 | - | - |
VV2_1304 | Beta-glucosidase-related glycosidase | - | COG1472G |
VV2_1309 | DMT family permease | - | - |
VV2_1363 | transcriptional regulator | - | COG0583K |