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Table 2 Clade 2-specific genes

From: SOLiD sequencing of four Vibrio vulnificus genomes enables comparative genomic analysis and identification of candidate clade-specific virulence genes

Tag Product Gene Cog
VV1_0456 putative transcriptional regulator - COG0583K
VV1_0457 hypothetical protein VV1_0457 - -
VV1_0458 hypothetical protein VV1_0458 - -
VV1_0459 hypothetical protein VV1_0459 - -
VV1_0465 exopolyphosphatase - COG0248FP
VV1_0515 hypothetical protein VV1_0515 - COG3930S
VV1_0766 hypothetical protein VV1_0766 - -
VV1_0789 hypothetical protein VV1_0789 - -
VV1_1090 hypothetical protein VV1_1090 - -
VV1_1094 chromosome segregation ATPase - -
VV1_1095 Serine/threonine protein kinase - COG0515RTKL
VV1_1518 3-methyladenine DNA glycosylase - COG0122L
VV1_1751 hypothetical protein VV1_1751 - -
VV1_2031 Type I restriction enzyme EcoEI M protein - COG0286V
VV1_2037 Type I restriction enzyme EcoEI R protein - COG4096V
VV1_2038 transcriptional regulator - -
VV1_2061 GGDEF family protein OMPH_PHOPR porin-like protein H - COG2199T
VV1_2114 precursor - COG3203M
VV1_2115 hypothetical protein VV1_2115 - COG3110S
VV1_2158 methyl-accepting chemotaxis protein - COG0840NT
VV1_2183 hypothetical protein VV1_2183 - COG2378K
VV1_2184 ATPase involved in DNA repair - COG0419L
VV1_2228 GGDEF family protein - COG3706T
VV1_2321 GGDEF family protein - COG3614T
VV1_2326 hypothetical protein VV1_2326 - -
VV1_2327 hypothetical protein VV1_2327 - -
VV1_2329 hypothetical protein VV1_2329 - -
VV1_2330 Flp pilus assembly protein CpaB - COG3745U
VV1_2331 Flp pilus assembly protein - COG4964U
VV1_2332 hypothetical protein VV1_2332 - -
VV1_2333 pilus assembly protein CpaE-like protein - COG4963U
VV1_2334 Flp pilus assembly protein - COG4962U
VV1_2335 Flp pilus assembly protein TadB - COG4965U
VV1_2336 Flp pilus assembly protein TadC - COG4965U
VV1_2337 Flp pilus assembly protein TadD - COG5010U
VV1_2338 hypothetical protein VV1_2338 - -
VV1_2339 hypothetical protein VV1_2339 - COG4961U
VV1_2340 hypothetical protein VV1_2340 - -
VV1_2341 azoreductase acpD COG1182I
VV1_2401 super-integron integrase IntIA - COG4974L
VV1_2708 hypothetical protein VV1_2708 - -
VV1_2748 response regulator - COG3437KT
VV1_2758 amino acid transporter - -
VV1_2840 NhaP-type Na+/H+ and K+/H+ antiporters - COG0025P
VV1_2868 methyl-accepting chemotaxis protein - COG0840NT
VV1_3144 hypothetical protein VV1_3144 - -
VV2_0019 alcohol dehydrogenase - COG1454C
VV2_0073 anti-anti-sigma regulatory factor - COG1366T
VV2_0074 anti-anti-sigma regulatory factor - COG1366T
VV2_0075 anti-sigma regulatory factor - COG2172T
VV2_0076 Serine phosphatase RsbU - -
VV2_0077 FOG: CheY-like receiver - COG0642T
VV2_0078 response regulator AraC-type DNA-binding domain-containing - COG3437KT
VV2_0212 protein - COG2207K
VV2_0312 hypothetical protein VV2_0312 - -
VV2_0313 response regulator - COG0745TK
VV2_0627 hypothetical protein VV2_0627 AraC-type DNA-binding domain-containing - COG2378K
VV2_0782 protein - COG2207K
VV2_0783 major facilitator superfamily permease - -
VV2_0851 hypothetical protein VV2_0851 - COG0845M
VV2_0864 hypothetical protein VV2_0864 - -
VV2_0868 acetyltransferase - COG0456R
VV2_0881 long-chain fatty acid ABC transporter - COG2067I
VV2_0884 Mg2+ and Co2+ transporter - -
VV2_0993 transcriptional regulator - COG0583K
VV2_0994 multidrug resistance efflux pump - COG1566V
VV2_1075 dehydrogenase - COG1028IQR
VV2_1138 hypothetical protein VV2_1138 - COG3904S
VV2_1149 hypothetical protein VV2_1149 - -
VV2_1186 transcriptional regulator - COG0583K
VV2_1203 hypothetical protein VV2_1203 - COG3930S
VV2_1204 glutathione synthetase - COG0189HJ
VV2_1273 transcriptional regulator - COG0583K
VV2_1274 Ca2+/H+ antiporter - COG0387P
VV2_1275 hypothetical protein VV2_1275 - COG0586S
VV2_1290 hypothetical protein VV2_1290 - COG0834ET
VV2_1303 hypothetical protein VV2_1303 - -
VV2_1304 Beta-glucosidase-related glycosidase - COG1472G
VV2_1309 DMT family permease - -
VV2_1363 transcriptional regulator - COG0583K