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Table 4 Selected genes up-regulated in swarm center

From: Gene expression in Pseudomonas aeruginosa swarming motility

Gene number Gene name Product name Swarm center vs. non-swarming fold change (log2)
Adaptation, Protection  
PA01401 ahpF alkyl hydroperoxide reductase subunit F 4.5
PA08481   probable alkyl hydroperoxide reductase 5.4
PA08491 trxB2 thioredoxin reductase 2 3.7
PA32871   conserved hypothetical protein 4.7
PA42361 katA catalase 3.4
PA46131 katB catalase 4.4
Energy metabolism  
PA41332   cytochrome c oxidase subunit (cbb3-type) 1.6
Hypothetical, unclassified, unknown  
PA32371   hypothetical protein 5.4
PA32871   hypothetical protein 4.7
PA35191   hypothetical protein 3.6
PA35203   hypothetical protein 1.8
Nucleotide biosynthesis and metabolism  
PA55411 pyrQ dihydroorotase 2.5
Transcriptional regulators  
PA48781   probable transcriptional regulator 3.7
Transport of small molecules  
PA2322 gntT gluconate permease 2.0
PA31872 gltK ATP-binding component of ABC transporter 2.6
PA31882 gltG permease of ABC sugar transporter 3.1
PA3189 gltF permease of ABC sugar transporter 2.5
PA35231 mexP probable Resistance-Nodulation-Cell Division (RND) efflux membrane fusion protein precursor 4.2
PA39201 cueA copper homeostasis P-type ATPase 2.6
PA5082   probable binding protein component of ABC transporter 1.5
  1. 1: Genes up-regulated in swarm center vs. NS and up-regulated in swarm center vs. tendril tip.
  2. 2: Genes up-regulated in swarm center vs. NS and up-regulated in tendril tip vs. NS (Table 1).
  3. 3: Gene up-regulated in swarm center vs. tendril tip only.