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Table 1 Codon usage for the 13 mitochondrial proteins of Panonychus citri

From: The complete mitochondrial genome of the citrus red mite Panonychus citri (Acari: Tetranychidae): high genome rearrangement and extremely truncated tRNAs

AA Codon n % RSCU AA Codon n % RSCU
Stop UAA 0 0 0 Asn (N) AAC 24 0.71 0.17
  UAG 0 0 0   AAU 262 7.76 1.83
Ala (A ) GCU 39 1.16 3.06 Pro (P) CCU 53 1.57 3.21
  GCG 1 0.03 0.08   CCG 0 0 0
  GCC 1 0.03 0.08   CCC 4 0.12 0.24
  GCA 10 0.30 0.78   CCA 9 0.27 0.55
Cys (C) UGU 16 0.47 1.68 Gln (Q) CAG 2 0.06 0.14
  UGC 3 0.09 0.32   CAA 26 0.77 1.86
Asp (D) GAU 38 1.13 1.73 Arg (R) CGA 16 0.47 2.29
  GAC 6 0.18 0.27   CGC 0 0 0
Glu (E) GAG 10 0.30 0.31   CGG 0 0 0
  GAA 55 1.63 1.69   CGU 12 0.36 1.71
Phe (F) UUU 516 15.28 1.90 Ser1 (S) AGC 8 0.24 0.22
  UUC 28 0.83 0.10   AGA 65 1.93 1.75
Gly (G) GGU 30 0.89 1.29   AGG 0 0 0
  GGG 14 0.41 0.60   AGU 39 1.16 1.05
  GGC 2 0.06 0.09 Ser2 (S) UCA 48 1.42 1.29
  GGA 47 1.39 2.02   UCC 8 0.24 0.22
His (H) CAC 4 0.12 0.17   UCG 1 0.03 0.03
  CAU 42 1.24 1.83   UCU 129 3.82 3.46
Ile (I) AUU 359 10.63 1.87 Thr (T) ACA 35 1.04 1.46
  AUC 26 0.77 0.14   ACC 2 0.06 0.08
Lys (K) AAA 150 4.44 1.86   ACG 2 0.06 0.08
  AAG 11 0.33 0.14   ACU 57 1.69 2.38
Leu1 (L1) CUA 22 0.65 1.42 Val (V) GUC 1 0.03 0.04
  CUC 0 0 0   GUG 2 0.06 0.08
  CUG 3 0.09 0.19   GUU 51 1.51 2.13
  CUU 37 1.10 2.39   GUA 42 1.24 1.75
Leu2 (L2) UUA 385 11.40 1.86 Trp (W) UGA 44 1.30 1.91
  UUG 28 0.83 0.14   UGG 2 0.06 0.09
Met (M) AUG 29 0.86 0.15 Tyr (Y) UAC 17 0.50 0.22
  AUA 363 10.75 1.85   UAU 140 4.15 1.78
  1. A total of 3,376 codons for P. citri are analyzed, excluding the start and stop codons. AA, amino acid; RSCU, Relative synonymous codon usage; n = frequency of each codon. % = n/3376.