Skip to main content

Table 2 Up-regulation of genes in iBMDCs treated with [BF/S+L/Ep] for (A) 4 h or (B) 12 h compared to DMSO alone

From: Stimulatory effect of Echinacea purpurea extract on the trafficking activity of mouse dendritic cells: revealed by genomic and proteomic analyses

  Gene Name Accession Number Expression Ratioa(+)/(-)
At 4 h:    
   Cluster 1 Adhesion molecules, Cytoskeleton, Cell movement   
   Ncam2 neural cell adhesion molecule 2 NM_010954 6.57
   Serpinb2 serine (or cysteine) peptidase inhibitor, clade B, member 2 NM_011111 4.50
   Ikbkg inhibitor of kappa B kinase gamma NM_010547 2.03
   Cluster 2 Immune response   
   Amot angiomotin NM_153319 2.48
   Cxcl5 chemokine (C-X-C motif) ligand 5 NM_009141 8.63
   Irg1 immunoresponsive gene 1 XM_127883 2.17
   Cxcl7 chemokine (C-X-C motif) ligand 7 NM_023785 2.08
   Cluster 3 Signal transmission, Transporter   
   Nrxn1 neurexin I Q9CS84 9.62
   Sorbs1 sorbin and SH3 domain containing 1 NM_009166 3.70
   Ahrr aryl-hydrocarbon receptor repressor NM_009644 2.37
   Abce1 ATP-binding cassette, sub-family E (OABP), member 1 NM_015751 2.10
   Cluster 4 Cell cycle, DNA repair, Apoptosis   
   Cyr61 cysteine rich protein 61 NM_010516 6.60
   Mtap9 microtubule-associated protein 9 Q3TRR0 2.64
   Cluster 5 Enzyme, Kinase   
   Ppfia1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF) XM_133979 2.74
   Cluster 6 DNA binding protein, Transcription factor   
   Wdhd1 WD-repeat HMG-box DNA binding protein 1 NM_172598 2.04
   Cluster 7 Miscellaneous   
   Prdm10 PR domain containing 10 Q3UTQ7 6.98
   Tdrd3 Tudor domain containing 3 NM_172605 3.48
   Mif4gd MIF4G domain containing NM_027162 2.16
   Dnahc2 dynein, axonemal, heavy chain 2 O08826 2.09
At 12 h:    
   Cluster 1 Adhesion molecules, Cytoskeleton, Cell movement   
   Serpinb2 serine (or cysteine) peptidase inhibitor, clade B, member 2 NM_011111 3.34
   Cspg2 chondroitin sulfate proteoglycan 2 NM_019389 2.20
   Mmp8 matrix metallopeptidase 8 NM_008611 2.18
   Myo1d Myosin ID NM_177390 2.07
   Cluster 2 Signal transmission, Transporter   
   Phip pleckstrin homology domain interacting protein Q32NY1 3.28
   Cd38 CD38 antigen NM_007646 2.51
   Rbp1 retinol binding protein 1, cellular NM_011254 2.28
   Ap3s2 adaptor-related protein complex 3, sigma 2 subunit NM_009682 2.12
   Golph4 golgi phosphoprotein 4 NM_175193 2.03
   Cluster 3 Enzyme, Kinase   
   Dnm1l dynamin 1-like NM_152816 13.11
   Wdfy3 WD repeat and FYVE domain containing 3 NM_172882 4.64
   Acpp acid phosphatase, prostate NM_019807 2.18
   Apc adenomatosis polyposis coli NM_007462 2.15
   Adhfe1 alcohol dehydrogenase, iron containing, 1 NM_175236 2.04
   Cluster 4 Immune response   
   Ctla4 cytotoxic T-lymphocyte-associated protein 4 NM_009843 11.16
   Cxcl7 chemokine (C-X-C motif) ligand 7 NM_023785 2.77
   Cluster 5 RNA binding protein, Translation factor   
   Mrps5 mitochondrial ribosomal protein S5 NM_029963 2.20
   Sf4 splicing factor 4 NM_027481 2.45
   Cluster 6 DNA binding protein, Transcription factor   
   Asb2 ankyrin repeat and SOCS box-containing protein 2 NM_023049 2.75
   Cluster 7 Miscellaneous   
   Dnahc2 dynein, axonemal, heavy chain 2 O08826 3.11
   Ccdc89 coiled-coil domain containing 89 Q9DA73 2.01
  1. a Expression ratio is defined as relative difference in expression with (+) compared to without (-) treatment with [BF/S+L/Ep] plant extract; (-) is DMSO vehicle control.