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Table 1 Assessment of performance on known ncRNA found in GeneDB

From: A comparative genome-wide study of ncRNAs in trypanosomatids

Type of ncRNA Annotated in Genedb v4 All 6 genomes 4 of 6 genomes
rRNA 106 22 (21%) 92 (87%)
snRNA 6 3 (50%) 5 (83%)
snoRNA 353 110 (31%) 188 (53%)
tRNA 65 64 (98%) 65 (100%)
misc RNA 29 28 (97%) 29 (100%)
Total 559 227 (41%) 379 (68%)
  1. Using the set of known ncRNA as the standard to evaluate the performance of our algorithm in detecting ncRNAs, the numbers of ncRNA molecules detected are listed, according to families, including those conserved in all six genomes or in 4/6 genomes (note that 6/6 conservation is a subset of the 4/6 conservation). The percent of the ncRNA family that was detected in the screen is listed in the parentheses.