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Table 1 Sample characteristics and assay performance

From: Analyses and interpretation of whole-genome gene expression from formalin-fixed paraffin-embedded tissue: an illustration with breast cancer tissues

   N Mean 95% Confidence Interval for Mean ANOVA
     Lower Bound Upper Bound Sig.
Detected Genes (0.05) N_FF 18 11274.94 10750.46 11799.43 0.788559493
  T_FF 18 11283.50 10278.99 12288.01  
  N_FFPE 18 11063.11 10498.01 11628.21  
  T_FFPE 18 11542.39 10951.83 12132.94  
  Total 72 11290.99 10965.42 11616.55  
Signal Average N_FF 18 1980.32 1972.98 1987.65 1.37991E-10
  T_FF 18 1951.04 1939.61 1962.46  
  N_FFPE 18 1932.33 1922.32 1942.33  
  T_FFPE 18 1929.77 1918.58 1940.97  
  Total 72 1948.36 1941.68 1955.05  
HOUSEKEEPING N_FF 18 6879.53 5605.81 8153.24 0.168579448
  T_FF 18 7897.44 6729.16 9065.73  
  N_FFPE 18 6620.02 5638.74 7601.30  
  T_FFPE 18 8180.73 6767.25 9594.20  
  Total 72 7394.43 6809.35 7979.51  
Block_Age N_FF 18 3.83 3.44 4.22 1
  T_FF 18 3.83 3.44 4.22  
  N_FFPE 18 3.83 3.44 4.22  
  T_FFPE 18 3.83 3.44 4.22  
  Total 72 3.83 3.65 4.01  
Difference of CT N_FF 18 7.45 6.69 8.21 0.011648246
  T_FF 18 8.36 7.27 9.45  
  N_FFPE 18 9.53 8.47 10.59  
  T_FFPE 18 7.87 7.00 8.74  
  Total 72 8.30 7.83 8.78