Observed (expected) | Excessive heterozygosity | Excessive homozygosity |
---|
Dissimilar among couples | 16 (7.97) | 20 (28.03) |
Similar among couples | 13 (21.03) | 82 (73.97) |
- SNPs that are dissimilar among couples in the IMSGC dataset tend to show excessive heterozygosity in the HapMap CEU samples, while markers that are similar among IMSGC couples show excessive homozygosity in the HapMap samples (chi-square p < 0.004, expected values shown in parentheses). In all, 131 SNPs showed significant similarity or dissimilarity among IMSGC couples (p < 0.024) and significant deviation from Hardy-Weinberg equilibrium in the independent HapMap CEU dataset (p < 0.024).