Species | Library code | Library name | Library type | Kit for library construction | No. of genotypes | Tissue | Sample stage/treatment |
---|---|---|---|---|---|---|---|
Q. petraea | A | LG0BAC | Standard | LambdaZAP | 50 | bud | Quiescent buds from 2-year-old trees (Phalsbourg (57-F) and Mirecourt (88-F)) sampled in April 7th and 9th, 2004 |
 | B | QpBudslate | Standard | CloneMiner | 2 | bud | Early swelling bud sampled in March 24th and 30th , 2006 on adult trees |
 | C | QpSwellingBud | Subtractive | SMART PCR, BD PCR-Select, pCR4 TOPO | 20 | bud | Swelling vs. quiescent buds, 1-year-old trees |
 | D | QpBudquiescent | Subtractive | SMART PCR, BD PCR-Select, pCR4 TOPO | 60 | bud | Developing (internodes have started to grow) vs. quiescent buds, 1-year-old trees |
 | E | QpVegetativeGrowth | Subtractive | SMART PCR, BD PCR-Select, pCR4 TOPO | 20 | bud | Quiescent vs. swelling buds, 1-year-old trees |
 | F | sessile48hours | Subtractive | SMART PCR, BD PCR-Select, pGEM-T easy | 10 | root | Hypoxia for 24 and 48 h. White roots from 6-month-old cuttings, 2005 |
 | G | sessile6 hours | Subtractive | SMART PCR, BD PCR-Select, pGEM-T easy | 10 | root | Hypoxia for 6 h. White roots from 6-month-old cuttings, 2005 |
 | H | Qp5stressRoots | Standard | CloneMiner | 15 | root | 6-month-old seedlings collected in October 2006, 1/10°C 3 days, 2/35°C 4 days, 3/CO2 700 ppm, 4/water stress, 5/hypoxie 48 h |
 | I | QpLeaf5stress | Standard | CloneMiner | 15 | leaf | 6-month-old seedlings collected in October 2006 : 1/10°C 3 days, 2/35°C 4 days, 3/CO2 700 ppm, 4/water stress, 5/hypoxie 48 h |
 | J | QpXyleme | Standard | Creator SMART | 2 | xylem | Secondary differentiating xylem sampled in May 21th, 2007 on adult trees |
Q. robur | K | QrBudsEarly | Standard | CloneMiner | 3 | bud | Setting bud sampled in October 26th, 2006 on adult trees |
 | L | QrBudslate | Standard | CloneMiner | 3 | bud | Swelling buds sampled in March 24th and 30th, 2007 on adult trees |
 | M | LG00BAD | Standard | LambdaZAP | 10 | root | Fine roots under optimal fertilization and Irrigation conditions, harvested in August 2004 [48] |
 | N | pedonculate6 hours | Subtractive | SMART PCR, BD PCR-Select, pGEM-T easy | 10 | root | Hypoxia for 6 h. White roots from 6-month-old cuttings, 2005 |
 | O | pedonculate48 hours | Subtractive | SMART PCR, BD PCR-Select, pGEM-T easy | 10 | root | Hypoxia for 24 and 48 h. White roots from 6-month-old cuttings, 2005 |
 | P | LG0BAA | Standard | LambdaZAP | 3 | leaf | Young leaves sampled on adult trees in April 27th, 2004 |
 | Q | HighWUE | Subtractive | SMART PCR, BD PCR-Select, pGEM-T easy | 5 | leaf | Green leaves on one-year-old cuttings, (high vs. low WUE) October 2005 |
 | R | LowWUE | Subtractive | SMART PCR, BD PCR-Select, pGEM-T easy | 5 | leaf | Green leaves on one-year-old cuttings, (low vs. high WUE) October 2005 |
 | S | LG0BAB | Standard | LambdaZAP | 3 | xylem | Secondary differentiating xylem sampled on adult trees in April 27th, 2004 |
 | T | QrAnoxie | Standard | Creator SMART | 10 | root | Hypoxia for 24 and 48 h. White roots from 6-month-old cuttings, 2005 |