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Table 4 Oak (Q. petraea and Q. robur) cDNA libraries for 454-pyrosequencing

From: Bioinformatic analysis of ESTs collected by Sanger and pyrosequencing methods for a keystone forest tree species: oak

Species Library code Library name Library type Kit for library construction No. of genotypes Tissue Sample stage/treatment
Q. petraea I LC1-EcoEndoDorm Standard SMART PCR cDNA Synthesis Kit 30 Buds Endodormancy, sampled in September 17th and 24th and October 1st, 2005
Q. petraea II LC2-EcoEndoDorm Standard SMART PCR cDNA Synthesis Kit 30 Buds Ecodormancy, sampled in January 14th and 28th and February 11th, 2005
Q. petraea III SJ1-EcoEndoDorm Standard SMART PCR cDNA Synthesis Kit 30 Buds Endodormancy, sampled in September 17th and 24th and October 1st, 2005
Q. petraea IV SJ2-EcoEndoDorm Standard SMART PCR cDNA Synthesis Kit 30 Buds Ecodormancy, sampled in January 14th and 28th and February 11th, 2005
Q. petraea V 10QS-Intersp Standard SMART PCR cDNA Synthesis Kit 10 Leaves, buds Young and mature leaves, quiescent and later buds
Q. robur VI 10QP-intersp Standard SMART PCR cDNA Synthesis Kit 10 Leaves, buds Young and mature leaves, quiescent and later buds
Q. petraea VII FS Standard SMART PCR cDNA Synthesis Kit 2 Flower Pollen, flowers
Q. robur VIII FP Standard SMART PCR cDNA Synthesis Kit 2 Flower Pollen, flowers
Q. petraea IX Qs21 Normalized MINT cDNA synthtesis Kit, 1 Leaves, buds Quiescent, swelling buds; young, mature leaves
Q. petraea X Qs28 Normalized MINT cDNA synthtesis Kit, 1 Leaves, buds Quiescent, swelling buds; young, mature leaves
Q. petraea XI Qs29 Normalized MINT cDNA synthtesis Kit, 1 Leaves, buds Quiescent, swelling buds; young, mature leaves
Q. robur XII 3P Normalized MINT cDNA synthtesis Kit, 1 Leaves, buds Quiescent, swelling buds; young, mature leaves
Q. robur XIII 11P Normalized MINT cDNA synthtesis Kit, 1 Leaves, buds Quiescent, swelling buds; young, mature leaves
Q. robur XIV A04 Normalized MINT cDNA synthtesis Kit, 1 Leaves, buds Quiescent, swelling buds; young, mature leaves
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BMC Genomics

ISSN: 1471-2164

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