Skip to main content

Table 3 Type VI secretion system core proteins in NRG857c

From: Genome sequence of adherent-invasive Escherichia coli and comparative genomic analysis with other E. coli pathotypes

Conserved domain(s)a NRG857c ortholog
ImpA N-terminal related/COG3515 NRG857_01095 hypothetical protein
IcmF-related/DUF1215/COG3523 NRG857_01090 IcmF-related protein
DUF879/COG3519 NRG857_01135 hypothetical protein
DUF877/COG3517 NRG857_01145 hypothetical protein
DUF876/COG3522 NRG857_01115 hypothetical protein
DUF770/COG3516 NRG857_01150 hypothetical protein
DUF1305/COG3520 NRG857_01130 hypothetical protein
ClpV NRG857_01105 putative ATP-dependent Clp proteinase
FHA domain/COG3456 NRG857_01125 hypothetical protein
COG3521 NRG857_01120 hypothetical protein
DotU (IcmH)-related/COG3455 NRG857_01110 hypothetical protein
Pfam04965/COG3518 NRG857_01140 hypothetical protein
Hcp/DUF796/COG3157 NRG857_01080 hemolysin co-regulated protein
  NRG857_01155 hemolysin co-regulated protein
VgrG/DUF586/COG3501 NRG857_01165 Vgr-like protein
  1. aas described in Reference 40