From: Simple sequence repeat variation in the Daphnia pulex genome
Table 3a: Gene content vs SSR abundance | ||||||||
---|---|---|---|---|---|---|---|---|
Motif Size | ||||||||
Abundance | 1 | 2 | 3 | 4 | 5 | 6 | 2 to 6 | Gene Content |
scaffold_18 | Â | Â | Â | Â | Â | Â | Â | + |
scaffold_32 | Â | + | Â | Â | + | Â | + | Â |
scaffold_43 | Â | + | Â | Â | Â | Â | + | Â |
scaffold_58 | Â | Â | Â | Â | + | Â | Â | Â |
scaffold_59 | Â | Â | Â | Â | Â | + | Â | Â |
scaffold_62 | Â | Â | Â | Â | + | Â | Â | Â |
scaffold_66 | Â | Â | Â | Â | - | Â | Â | Â |
scaffold_67 | Â | Â | Â | Â | Â | + | Â | + |
scaffold_68 | + | Â | Â | Â | Â | Â | Â | Â |
scaffold_74 | Â | + | Â | Â | Â | Â | + | - |
scaffold_76 | Â | + | Â | + | Â | + | Â | Â |
scaffold_81 | + | Â | Â | Â | Â | Â | Â | Â |
scaffold_82 | + | Â | Â | Â | + | Â | Â | - |
scaffold_84 | Â | Â | Â | Â | Â | Â | Â | - |
scaffold_85 | Â | Â | Â | Â | Â | + | Â | Â |
scaffold_88 | Â | Â | Â | Â | + | Â | Â | Â |
scaffold_90 | Â | Â | + | + | Â | Â | Â | Â |
scaffold_98 | Â | Â | Â | Â | Â | - | Â | Â |
Table 3b: G/C content vs SSR heterozygosity | ||||||||
Motif Size | ||||||||
Heterozygosity | 1 | 2 | 3 | 4 | 5 | 6 | 2 to 6 | G/C Content |
scaffold_7 | Â | Â | Â | Â | Â | + | Â | Â |
scaffold_18 | Â | Â | Â | Â | + | Â | Â | Â |
scaffold_19 | Â | Â | Â | Â | Â | + | Â | Â |
scaffold_20 | Â | Â | Â | Â | + | Â | Â | Â |
scaffold_24 | Â | Â | Â | + | Â | + | Â | Â |
scaffold_30 | + | + | + | Â | Â | Â | + | Â |
scaffold_32 | Â | Â | Â | + | Â | Â | Â | Â |
scaffold_33 | Â | Â | Â | Â | + | Â | Â | Â |
scaffold_43 | Â | + | Â | Â | Â | Â | Â | Â |
scaffold_63 | Â | Â | Â | Â | Â | + | Â | Â |
scaffold_69 | Â | Â | Â | Â | Â | + | Â | Â |
scaffold_75 | Â | Â | Â | Â | + | Â | Â | Â |
scaffold_76 | Â | + | Â | Â | Â | + | + | Â |
scaffold_77 | Â | Â | + | Â | Â | Â | + | Â |
scaffold_82 | Â | Â | Â | Â | Â | Â | Â | - |
scaffold_90 | Â | Â | + | + | Â | Â | + | + |
scaffold_94 | Â | Â | Â | + | Â | Â | Â | Â |