BMC Genomics

Table 8 Average nucleotide polymorphism (θw), nucleotide diversity (θπ), and Tajima's D per chromosome

From: Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes

	T. aestivum									Wild emmer						Synthetic wheats
	A genome (× 10^-3)			B genome (× 10^-3)			D genome (× 10^-3)			A genome (× 10^-3)			B genome (× 10^-3)			D genome (× 10^-3)
Chromosome	θ _w	θ _π	D	θ _w	θ _π	D	θ _w	θ _π	D	θ _w	θ _π	D	θ _w	θ _π	D	θ _w	θ _π	D
1	0.67	0.64	-0.14	0.66	0.71	0.07	0.31	0.32	-0.10*	0.69	0.73	0.09	0.82	0.90	0.37	1.18	1.28	0.42
2	0.56	0.57	0.08	0.74*	0.87*	0.30	0.40	0.29	-0.65	0.83*	0.96*	0.50*	0.79	0.81	0.06	1.07*	1.23	0.57
3	0.49	0.46	-0.21	0.66	0.72	0.30	0.11*	0.08*	-0.79	0.60	0.65	0.21	0.81	0.76	-0.10	1.16	1.37	0.73
4	0.45*	0.42*	-0.11	0.24*	0.16*	-0.78*	0.15	0.10	-0.77	0.59	0.50*	-0.39*	0.75	0.61	-0.56*	1.19	1.41	0.61
5	0.77*	0.76*	0.15	0.45	0.48	0.21	0.09*	0.06*	-0.84	0.54*	0.51*	-0.18	0.56*	0.47*	-0.58*	1.65*	1.82*	0.39
6	0.60	0.66	0.26	0.65	0.66	0.06	0.21	0.21	-0.27	0.77	0.80*	0.05	0.79	0.76	-0.07	1.67*	1.90*	0.44
7	0.63	0.51	-0.57	0.66	0.59	-0.28*	0.24	0.16	-0.86	0.69*	0.77*	0.38*	0.77	0.74	-0.05	1.34	1.63	0.78*
Coef. variat.	0.18	0.21		0.30	0.38		0.52	0.59		0.15	0.23		0.12	0.19		0.18	0.18

* Means outside of the 99% bootstrap confidence interval of the genome mean

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