Gene discovery in the horned beetle Onthophagus taurus

BMC Genomics

Table 2 Sequence matches against public databases

Database	E-value	Contigs		Singletons		Total
		Query	Subject	Query	Subject	Query	Subject
NCBI NR	10^-5	21,275	12,739	2,715	2,371	23,990	14,223
	10^-20	14,359	9,604	1,357	1,261	15,716	10,394
	10^-50	8,068	6,350	373	356	8,441	6,574
Tribolium unigene	10^-5	14,807	5,158	3,448	1,760	18,255	5,322
	10^-20	10,260	4,671	2,236	1,259	12,946	4,799
	10^-50	5,945	3,791	1,011	624	6,956	3,880
Tribolium annotated proteins	10^-5	20,560	8,911	2,185	1,614	22,745	9,303
	10^-20	14,497	7,888	1,124	951	15,621	8,203
	10^-50	8,100	5,798	316	284	8,416	5,907

The total numbers of Onthophagus sequences with matches against public databases at the indicated E-value cut-off. Databases: NCBI NR [52], Tribolium UniGene [91], and Tribolium proteins [92]. "Query" denotes the total number of Onthophagus sequences with matches against sequences from the database at the indicated cut-off. "Subject" denotes the total number of sequences from the indicated database with matches against Onthophagus sequences at the indicated E-value cut-off.

ISSN: 1471-2164