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Table 2 Differentially regulated AP2/ERF genes during ripening in the skin tissues.

From: Genomic and transcriptomic analysis of the AP2/ERF superfamily in Vitis vinifera

Genes up-regulated in the transition from veraison to ripe in the skin tissues Genes down-regulated in the transition from veraison to ripe in the skin tissues
Name Fold Change (log2) S.D. Family-Group Name Fold Change (log2) S.D. Family-Group
VvAP2-3 14.02   AP2 VvERF001 -8.6 2.62 ERF-I
VvERF036 11.17   ERF-IV VvERF018 -5.87   ERF-III
VvERF051 10.04   ERF-V VvERF141 -5.35 3.24 RAV
VvAP2-5 8.97   AP2 VvERF002 -4.86 2.25 ERF-I
VvAP2-16 8.71   AP2 VvERF012 -4.46 2.21 ERF-III
VvERF94 8.39   ERF-IX VvERF104 -4.4 3.74 ERF-IX
VvERF102 8.34   ERF-IX VvERF055 -4.35 3.48 ERF-VI
VvERF098 8.19 0.83 ERF-IX VvERF044 -3.61 2.51 ERF-V
VvERF020 8.12   ERF-III VvERF082 -3.6 2.14 ERF-IX
VvERF042 7.53   ERF-V VvERF092 -3.55 0.92 ERF-IX
VvERF111 7.17 1.95 ERF-IX VvERF028 -3.38 2.64 ERF-III
VvAP2-10 6.37   AP2 VvERF084 -3.29 1.16 ERF-IX
VvERF067 6.22   ERF-VIII VvAP2-14 -3.15   AP2
VvERF103 5.91   ERF-IX VvERF108 -2.82 1.36 ERF-IX
VvERF077 5.79 1.78 ERF-IX VvAP2-20 -2.71 1.7 AP2
VvERF093 5.67 2.06 ERF-IX VvERF071 -2.7 0.68 ERF-IX
VvERF038 5.28 1.58 ERF-IV VvERF105 -2.45 1.72 ERF-IX
VvERF097 5.24 2.31 ERF-IX VvERF035 -2.24   ERF-III
VvERF017 5.21 2.69 ERF-III     
VvERF120 5.18 0.59 ERF-X     
VvERF070 5.02 0.62 ERF-VIII     
VvERF142 4.58 0.55 RAV     
VvAP2-17 4.04 1.5 AP2     
VvERF086 3.93 1.68 ERF-IX     
VvERF074 3.59 1.94 ERF-IX     
VvERF032 3.59 0.7 ERF-III     
VvERF040 3.37 1 ERF-IV     
VvERF072 3.35   ERF-IX     
VvERF060 3.33   ERF-VIII     
VvERF087 2.08   ERF-IX     
VvERF109 2.03 0.39 ERF-IX     
  1. Relative mRNA levels ERF, AP2 and RAV members up- or down-regulated in the skin tissues of the grapevine berry during transition from the veraison stage to full ripeness, quantified by RT-qPCR, according to the 2-ΔΔCt method. The results shown are from at least three independent replicates. Expression values for which a standard deviation (SD) is not provided, correspond to samples that did not reach the selected threshold fluorescence level before the 39th cycle in one of the two ripening stages.