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Table 3 Differentially regulated AP2/ERF genes during ripening in the flesh tissues.

From: Genomic and transcriptomic analysis of the AP2/ERF superfamily in Vitis vinifera

Genes up-regulated in the transition from veraison to ripe in the flesh tissues Genes down-regulated in the transition from veraison to ripe in the flesh tissues
Name Fold Change (log2) S.D. Family-Group Name Fold Change (log2) S.D. Family-Group
VvERF046 6.46 0.65 ERF-V VvERF114 -14.37   ERF-X
VvERF118 5.31 1.87 ERF-X VvERF146 -7.94   RAV
VvERF047 5.2 0.64 ERF-V VvERF100 -7.3   ERF-IX
VvERF027 4.69   ERF-III VvERF107 -6.48   ERF-IX
VvERF053 4.5 3.5 ERF-VI VvAP2-1 -6.07   AP2
VvERF072 4.27 1.61 ERF-IX VvERF099 -5.85 5.29 ERF-IX
VvERF071 4.14 1.66 ERF-IX VvERF085 -5.64 2.69 ERF-IX
VvERF023 4 0.81 ERF-III VvERF106 -5.23 0.89 ERF-IX
VvERF092 3.45 1.88 ERF-IX VvAP2-5 -4.9   AP2
VvAP2-13 3.35 1.35 AP2 VvERF097 -4.71   ERF-IX
VvERF095 3.13 1.09 ERF-IX VvERF010 -4.64 2.29 ERF-II
VvAP2-8 3.13 0.39 AP2 VvERF029 -4.54 4.02 ERF-III
VvAP2-3 3.05   AP2 VvERF022 -4.44 1.46 ERF-III
VvERF094 2.81 1.81 ERF-IX VvERF111 -3.96 0.03 ERF-IX
VvERF103 2.56   ERF-IX VvAP2-17 -3.83 1.85 AP2
VvERF045 2.47 2.23 ERF-V VvAP2-16 -3.53   AP2
VvERF006 2.45 1.35 ERF-II VvERF020 -3.51   ERF-III
VvAP2-12 2.3 1.74 AP2 VvERF054 -3.49 0.08 ERF-VI
     VvERF087 -3.49   ERF-IX
     VvERF079 -3.25 2.53 ERF-IX
     VvERF096 -3.16 2.47 ERF-IX
     VvERF016 -3.13 2.01 ERF-III
     VvERF05 -3.12 2.4 ERF-I
     VvERF122 -3 1.09 ERF-6-L
     VvERF117 -2.81 0.6 ERF-X
     VvERF024 -2.42 1.07 ERF-III
     VvERF040 -2.38 0.41 ERF-IV
     VvERF051 -2.34 0.96 ERF-V
     VvERF098 -2.21 1.47 ERF-IX
     VvERF018 -2.09   ERF-III
  1. Relative mRNA levels ERF, AP2 and RAV members up- or down-regulated in the flesh tissues of the grapevine berry during transition from the veraison stage to full ripeness, quantified by RT-qPCR, according to the 2-ΔΔCt method. The results shown are from at least three independent replicates. Expression values for which a standard deviation (SD) is not provided, correspond to samples that did not reach the selected threshold fluorescence level before the 39th cycle in one of the two ripening stages.