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Table 2 Average estimates of minor allele frequency, number of alleles per locus, and polymorphism information content.

From: Population- and genome-specific patterns of linkage disequilibrium and SNP variation in spring and winter wheat (Triticum aestivum L.)

Population Growth Habit Origin Number of lines Proportion of polymorphic SNPs, (%) MAF Number of alleles PIC
SD winter SD 21 79.5 0.13 1.62 0.14
NE winter NE 49 84.8 0.12 1.7 0.14
OK winter OK 40 84.8 0.14 1.7 0.16
WB winter WestBred 11 78.4 0.15 1.59 0.16
CO winter CO 30 82.7 0.13 1.64 0.15
TX winter TX 38 85 0.14 1.73 0.16
MT winter MT 34 82.6 0.12 1.65 0.14
KS winter KS 4 64.9 0.1 1.32 0.1
NY winter NY 10 70.3 0.1 1.44 0.11
Winter wheat winter   237 89.2 0.14 1.89 0.17
WB spring WestBred 30 82.4 0.14 1.66 0.16
SD spring SD 40 80.7 0.13 1.6 0.14
MT spring MT 30 85 0.17 1.71 0.18
MN spring MN 40 84.8 0.14 1.71 0.16
ID spring ID 30 83.2 0.16 1.65 0.17
WA spring WA 10 78.1 0.15 1.56 0.16
CA spring CA 30 87 0.16 1.72 0.18
CM spring CIMMYT 31 85.2 0.14 1.72 0.16
Spring wheat spring   241 89.1 0.18 1.94 0.2
Total    478   0.18 2 0.2