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Figure 7 | BMC Genomics

Figure 7

From: Analysis of deep sequencing microRNA expression profile from human embryonic stem cells derived mesenchymal stem cells reveals possible role of let-7 microRNA family in downstream targeting of Hepatic Nuclear Factor 4 Alpha

Figure 7

32 transcripts is an optimum threshold for achieving similar cumulative frequency distribution amongst replicates. KS statistics was applied iteratively to our biological replicates (red and black lines), each graph depicts a gradual change in the threshold value. The KS test statistics can be thought of as a cost function that we seek to minimize to ensure that the distributions between the two replicates are similar. Applying such a strategy iteratively as we change the threshold value gradually, we arrive at a point where both line converge together indicating similar distributions. The point where this first occurs is designated as the minimum threshold count value of biological significance.

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