Table 4 Activation state change examples
From: Inferring gene regulatory networks from asynchronous microarray data with AIRnet
| equal, non-zero activation state changes - v xy incremented | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| wt | G1(-/-) | G2(-/-) | G3(-/-) | G4(-/-) | G5(-/-) | G6(-/-) | G7(-/-) | G8(-/-) | |
| G1 | 0 |
|
| 0 | 0 | 0 | 0 | 0 | 0 |
| G2 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 |
| G3 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| G4 | 1 | 0 | 1 | 0 | 0 | 1 | 1 | 1 | 1 |
| G5 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 |
| G6 | 0 |
|
| 0 | 0 | 0 | 0 | 0 | 0 |
| equal magnitude, opposing-signed activation state changes - v xy decremented | |||||||||
| wt | G1(-/-) | G2(-/-) | G3(-/-) | G4(-/-) | G5(-/-) | G6(-/-) | G7(-/-) | G8(-/-) | |
| G1 | 0 | 0 |
|
| 0 | 0 | 0 | 0 | 0 |
| G2 | 1 | 1 |
|
| 1 | 1 | 1 | 1 | 1 |
| G3 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| G4 | 1 | 0 | 1 | 0 | 0 | 1 | 1 | 1 | 1 |
| G5 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 |
| G6 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| activation state changes equal to zero - q xy incremented | |||||||||
| wt | G1(-/-) | G2(-/-) | G3(-/-) | G4(-/-) | G5(-/-) | G6(-/-) | G7(-/-) | G8(-/-) | |
| G1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| G2 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 |
| G3 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
|
|
| G4 | 1 | 0 | 1 | 0 | 0 | 1 | 1 |
|
|
| G5 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 |
| G6 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |